BLASTX nr result

ID: Atractylodes22_contig00047655 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00047655
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308876.1| chromatin remodeling complex subunit [Populu...   133   2e-29
emb|CBI32804.3| unnamed protein product [Vitis vinifera]              130   1e-28
ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-a...   130   1e-28
ref|XP_002871139.1| SNF2 domain-containing protein [Arabidopsis ...   129   2e-28
gb|AAM13184.1| helicase-like transcription factor-like protein [...   125   4e-27

>ref|XP_002308876.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222854852|gb|EEE92399.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 799

 Score =  133 bits (334), Expect = 2e-29
 Identities = 60/81 (74%), Positives = 76/81 (93%)
 Frame = +2

Query: 158 TYMVGFLVANIVGLQYYSGRISGREMVGLVREPLNPFDPNAIKVVNTRTIQVGHVEKKVA 337
           ++MVGF++ANIVGLQYYSG I+GRE+VGLVREPLNPFD NA+KV+NTR +QVGH+E+ VA
Sbjct: 7   SFMVGFVIANIVGLQYYSGTITGRELVGLVREPLNPFDQNALKVLNTRCLQVGHIERSVA 66

Query: 338 TVLAPLIDSNLVHVEGIVPNT 400
            VL+PLIDSN+++VEGIVPN+
Sbjct: 67  AVLSPLIDSNMINVEGIVPNS 87


>emb|CBI32804.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  130 bits (327), Expect = 1e-28
 Identities = 61/81 (75%), Positives = 72/81 (88%)
 Frame = +2

Query: 158 TYMVGFLVANIVGLQYYSGRISGREMVGLVREPLNPFDPNAIKVVNTRTIQVGHVEKKVA 337
           TY+VGF++ NIVG+QYYSG ISGRE VGLVREPLNP+D NAIKV+NT TIQVGH+++  A
Sbjct: 53  TYLVGFVIVNIVGIQYYSGTISGRERVGLVREPLNPYDRNAIKVLNTTTIQVGHIDRSAA 112

Query: 338 TVLAPLIDSNLVHVEGIVPNT 400
            VLAPL+D+NLV VEGIVPNT
Sbjct: 113 AVLAPLMDANLVTVEGIVPNT 133


>ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 1-like [Vitis vinifera]
          Length = 874

 Score =  130 bits (327), Expect = 1e-28
 Identities = 61/81 (75%), Positives = 72/81 (88%)
 Frame = +2

Query: 158 TYMVGFLVANIVGLQYYSGRISGREMVGLVREPLNPFDPNAIKVVNTRTIQVGHVEKKVA 337
           TY+VGF++ NIVG+QYYSG ISGRE VGLVREPLNP+D NAIKV+NT TIQVGH+++  A
Sbjct: 40  TYLVGFVIVNIVGIQYYSGTISGRERVGLVREPLNPYDRNAIKVLNTTTIQVGHIDRSAA 99

Query: 338 TVLAPLIDSNLVHVEGIVPNT 400
            VLAPL+D+NLV VEGIVPNT
Sbjct: 100 AVLAPLMDANLVTVEGIVPNT 120


>ref|XP_002871139.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316976|gb|EFH47398.1| SNF2 domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 861

 Score =  129 bits (325), Expect = 2e-28
 Identities = 60/81 (74%), Positives = 75/81 (92%)
 Frame = +2

Query: 158 TYMVGFLVANIVGLQYYSGRISGREMVGLVREPLNPFDPNAIKVVNTRTIQVGHVEKKVA 337
           +Y++GF++ANIVGL+YYSGRI+GREMVGLVREPLNP+D NAI+V+NTR+ QVGH+E+ VA
Sbjct: 36  SYLIGFVIANIVGLKYYSGRINGREMVGLVREPLNPYDNNAIRVLNTRSEQVGHIERTVA 95

Query: 338 TVLAPLIDSNLVHVEGIVPNT 400
            VLAPLIDS+ + VEGIVPNT
Sbjct: 96  AVLAPLIDSHTIIVEGIVPNT 116


>gb|AAM13184.1| helicase-like transcription factor-like protein [Arabidopsis
           thaliana]
          Length = 310

 Score =  125 bits (314), Expect = 4e-27
 Identities = 58/81 (71%), Positives = 74/81 (91%)
 Frame = +2

Query: 158 TYMVGFLVANIVGLQYYSGRISGREMVGLVREPLNPFDPNAIKVVNTRTIQVGHVEKKVA 337
           +Y++GF++ANIVGL+YYSGRI+GREMVGLVREPLN +D NAI+V+NTR+ QVGH+E+ VA
Sbjct: 42  SYLIGFVIANIVGLKYYSGRINGREMVGLVREPLNVYDNNAIRVLNTRSEQVGHIERTVA 101

Query: 338 TVLAPLIDSNLVHVEGIVPNT 400
            VLAP+IDS+ + VEGIVPNT
Sbjct: 102 AVLAPMIDSHTIVVEGIVPNT 122


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