BLASTX nr result

ID: Atractylodes22_contig00047620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00047620
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282494.1| PREDICTED: RING-H2 finger protein ATL78 [Vit...   203   1e-50
ref|XP_002522191.1| RING-H2 finger protein ATL1L, putative [Rici...   202   2e-50
gb|ACU18824.1| unknown [Glycine max]                                  201   5e-50
ref|XP_003523240.1| PREDICTED: RING-H2 finger protein ATL78-like...   201   7e-50
ref|NP_175349.1| RING-H2 finger protein ATL78 [Arabidopsis thali...   199   3e-49

>ref|XP_002282494.1| PREDICTED: RING-H2 finger protein ATL78 [Vitis vinifera]
           gi|147833208|emb|CAN75293.1| hypothetical protein
           VITISV_042413 [Vitis vinifera]
          Length = 224

 Score =  203 bits (517), Expect = 1e-50
 Identities = 103/158 (65%), Positives = 118/158 (74%)
 Frame = -3

Query: 524 ICSLGLNSIIRCVLRCSSSVHSESITSQESTPTKLANTGIKKKALKTFPTVSYWEGLKLP 345
           ICSLGLNSIIRC LRCSS V S       S  T+LANTG+KKKALKTFPT++Y  GL LP
Sbjct: 74  ICSLGLNSIIRCALRCSSLVASPG----NSPSTRLANTGVKKKALKTFPTLNYSAGLNLP 129

Query: 344 GLDKECVICLSEFVSEERVKILPKCNHGFHVRCIDKWLSSHSSCPTCRHSLIETCQKILS 165
           GLD ECVICLS+F   ER++ILPKCNHGFHVRCIDKWL+SHSSCPTCRH LIETCQKI+ 
Sbjct: 130 GLDTECVICLSDFTPGERIRILPKCNHGFHVRCIDKWLNSHSSCPTCRHCLIETCQKIIG 189

Query: 164 GGTCINTTSSQFQEQEPRNINTVSIMPLQPERFVQGYR 51
              C   +SS   E  P    ++ I+PL+PE F + YR
Sbjct: 190 ---CSQASSS---ETPPPLQESMIIVPLEPEGFSRNYR 221


>ref|XP_002522191.1| RING-H2 finger protein ATL1L, putative [Ricinus communis]
           gi|223538562|gb|EEF40166.1| RING-H2 finger protein
           ATL1L, putative [Ricinus communis]
          Length = 223

 Score =  202 bits (515), Expect = 2e-50
 Identities = 103/158 (65%), Positives = 118/158 (74%)
 Frame = -3

Query: 524 ICSLGLNSIIRCVLRCSSSVHSESITSQESTPTKLANTGIKKKALKTFPTVSYWEGLKLP 345
           ICSLGLNSIIRC LRCSS V S S    +++   LANTG+K+KALKTFPTV+Y   L LP
Sbjct: 73  ICSLGLNSIIRCALRCSSLVASRSA---DNSSAGLANTGVKRKALKTFPTVNYSTDLNLP 129

Query: 344 GLDKECVICLSEFVSEERVKILPKCNHGFHVRCIDKWLSSHSSCPTCRHSLIETCQKILS 165
           GLD EC ICLSEF   ERV++LPKCNHGFHVRCIDKWLSSHSSCPTCRH LIETCQKI+ 
Sbjct: 130 GLDTECAICLSEFTPGERVRLLPKCNHGFHVRCIDKWLSSHSSCPTCRHCLIETCQKIVG 189

Query: 164 GGTCINTTSSQFQEQEPRNINTVSIMPLQPERFVQGYR 51
              C  T+SS    QE    + V+I PL+PE  ++ YR
Sbjct: 190 ---CSQTSSSDPPVQE----SIVNIAPLEPEALIRSYR 220


>gb|ACU18824.1| unknown [Glycine max]
          Length = 239

 Score =  201 bits (511), Expect = 5e-50
 Identities = 102/166 (61%), Positives = 122/166 (73%), Gaps = 8/166 (4%)
 Frame = -3

Query: 524 ICSLGLNSIIRCVLRCSSSVHSESITSQESTP---TKLANTGIKKKALKTFPTVSYWEGL 354
           ICSLGLNSIIRC LRCS+ V S+S+ +  + P    ++ANTG+KKKALKTFPTVSY   L
Sbjct: 72  ICSLGLNSIIRCALRCSNFVVSDSVATNNNNPPAAARVANTGVKKKALKTFPTVSYSAEL 131

Query: 353 KLPGLDKECVICLSEFVSEERVKILPKCNHGFHVRCIDKWLSSHSSCPTCRHSLIETCQK 174
            LP LD ECVICLSEF S ++V+ILPKCNH FHVRCIDKWLSSHSSCP CR  LIETCQK
Sbjct: 132 NLPSLDSECVICLSEFTSGDKVRILPKCNHRFHVRCIDKWLSSHSSCPKCRQCLIETCQK 191

Query: 173 ILSGGTCINTTSSQFQEQE-----PRNINTVSIMPLQPERFVQGYR 51
           I+   T   ++S Q Q+Q+     P  I T+ + PL+PE  V+ YR
Sbjct: 192 IVGCSTQQASSSQQQQQQQHVLAVPETIVTI-VAPLEPESLVRNYR 236


>ref|XP_003523240.1| PREDICTED: RING-H2 finger protein ATL78-like [Glycine max]
          Length = 239

 Score =  201 bits (510), Expect = 7e-50
 Identities = 102/166 (61%), Positives = 122/166 (73%), Gaps = 8/166 (4%)
 Frame = -3

Query: 524 ICSLGLNSIIRCVLRCSSSVHSESITSQESTP---TKLANTGIKKKALKTFPTVSYWEGL 354
           ICSLGLNSIIRC LRCS+ V S+S+ +  + P    ++ANTG+KKKALKTFPTVSY   L
Sbjct: 72  ICSLGLNSIIRCALRCSNFVVSDSVATNNNNPPAAARVANTGVKKKALKTFPTVSYSAEL 131

Query: 353 KLPGLDKECVICLSEFVSEERVKILPKCNHGFHVRCIDKWLSSHSSCPTCRHSLIETCQK 174
            LP LD ECVICLSEF S ++V+ILPKCNH FHVRCIDKWLSSHSSCP CR  LIETCQK
Sbjct: 132 NLPSLDSECVICLSEFTSGDKVRILPKCNHRFHVRCIDKWLSSHSSCPKCRQCLIETCQK 191

Query: 173 ILSGGTCINTTSSQFQEQE-----PRNINTVSIMPLQPERFVQGYR 51
           I+   T   ++S Q Q+Q+     P  I T+ + PL+PE  V+ YR
Sbjct: 192 IVGCSTQQASSSQQQQQQQHVLAVPETIVTI-VAPLEPEGLVRNYR 236


>ref|NP_175349.1| RING-H2 finger protein ATL78 [Arabidopsis thaliana]
           gi|68565178|sp|Q6NQG7.1|ATL78_ARATH RecName:
           Full=RING-H2 finger protein ATL78
           gi|34365601|gb|AAQ65112.1| At1g49230 [Arabidopsis
           thaliana] gi|51970612|dbj|BAD43998.1| putative RING zinc
           finger protein [Arabidopsis thaliana]
           gi|51971166|dbj|BAD44275.1| putative RING zinc finger
           protein [Arabidopsis thaliana]
           gi|332194286|gb|AEE32407.1| RING-H2 finger protein ATL78
           [Arabidopsis thaliana]
          Length = 219

 Score =  199 bits (505), Expect = 3e-49
 Identities = 97/158 (61%), Positives = 120/158 (75%)
 Frame = -3

Query: 524 ICSLGLNSIIRCVLRCSSSVHSESITSQESTPTKLANTGIKKKALKTFPTVSYWEGLKLP 345
           +CSLGLNSIIRC LRCS+ V SE+    ++ P +L NTG+K+KALK+F TVSY   L LP
Sbjct: 68  VCSLGLNSIIRCALRCSNLVPSEA--GGDNYPVRLTNTGVKRKALKSFQTVSYSTELNLP 125

Query: 344 GLDKECVICLSEFVSEERVKILPKCNHGFHVRCIDKWLSSHSSCPTCRHSLIETCQKILS 165
           GLD EC ICLSEFV+EERVK+LP C+HGFHVRCIDKWLSSHSSCPTCRH LI+TC+KI  
Sbjct: 126 GLDTECAICLSEFVAEERVKLLPTCHHGFHVRCIDKWLSSHSSCPTCRHCLIQTCEKIAD 185

Query: 164 GGTCINTTSSQFQEQEPRNINTVSIMPLQPERFVQGYR 51
                + TSS    Q P++   + I PL+PER+++ +R
Sbjct: 186 ----CSQTSSLNSTQPPQDSIILQIAPLEPERWIRWFR 219


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