BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00047581
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAW63130.1| 31 kDa putative protein [Strawberry latent ringsp...   104   8e-21
ref|NP_620833.1| 36 kDa protein [Strawberry latent ringspot viru...   103   2e-20

>gb|AAW63130.1| 31 kDa putative protein [Strawberry latent ringspot virus satellite
           RNA]
          Length = 287

 Score =  104 bits (259), Expect = 8e-21
 Identities = 70/142 (49%), Positives = 85/142 (59%), Gaps = 12/142 (8%)
 Frame = +1

Query: 1   GGSSRRERPQRAVTKQPVVRPIRAP--VKVENRFSPLCVEESLVAPKS-----KITYADV 159
           GG+ RRERP     K   VRPIR P  VK  NRF+PL V+E + A  +     K +YAD 
Sbjct: 56  GGNFRRERPLVVSHKTQQVRPIRMPAAVKTSNRFAPLSVKEGVTAAVAAPINPKKSYADA 115

Query: 160 VRAK--VSPAKAKKGVVTLIETSRDFKLFED---LPEPVAIPGQTPQEAASLSREFAKRA 324
           +R+   V P+  +KGVVTL+ET +DF LF D     + V  PGQT  EA +L REF KR 
Sbjct: 116 LRSSAFVKPS-VRKGVVTLVETEKDFALFGDEFTQNQVVPCPGQTLPEAEALQREFHKRT 174

Query: 325 LVFSGRRLMPVGLPEDHSTDPF 390
           L FSGRRL   GLP    +DPF
Sbjct: 175 LAFSGRRLSVSGLPS--GSDPF 194


>ref|NP_620833.1| 36 kDa protein [Strawberry latent ringspot virus satellite RNA]
           gi|478364|pir||JQ2018 hypothetical 36.5K protein -
           strawberry latent ringspot virus
           gi|312511|emb|CAA49480.1| 36 kDa protein [Strawberry
           latent ringspot virus satellite RNA]
          Length = 331

 Score =  103 bits (256), Expect = 2e-20
 Identities = 71/135 (52%), Positives = 82/135 (60%), Gaps = 12/135 (8%)
 Frame = +1

Query: 1   GGSSRRERPQRAVTKQPVVRPIRAP--VKVENRFSPLCVEESL---VAP--KSKITYADV 159
           GGS RRERP     K   VRPIR P  VK  NRF+ L V+E     VAP    K +YAD 
Sbjct: 56  GGSFRRERPPVVSHKTQQVRPIRTPTAVKTSNRFASLSVKEEAPEAVAPFNPKKKSYADA 115

Query: 160 VRAK--VSPAKAKKGVVTLIETSRDFKLFED---LPEPVAIPGQTPQEAASLSREFAKRA 324
           +R+   V P+ A+KGVVTL+ET +DF LF D     + V  PGQT  EA SL REF KRA
Sbjct: 116 LRSSAFVKPS-ARKGVVTLVETEKDFALFCDEFTQNQVVPCPGQTLSEAESLQREFHKRA 174

Query: 325 LVFSGRRLMPVGLPE 369
             FSG+RL   GLPE
Sbjct: 175 FAFSGKRLSVSGLPE 189