BLASTX nr result

ID: Atractylodes22_contig00047569 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00047569
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513659.1| conserved hypothetical protein [Ricinus comm...   124   1e-26
ref|XP_004145899.1| PREDICTED: probable RNA-binding protein 18-l...   117   1e-24
emb|CBI22666.3| unnamed protein product [Vitis vinifera]              115   3e-24
ref|XP_003549030.1| PREDICTED: probable RNA-binding protein 18-l...   115   4e-24
ref|XP_003533164.1| PREDICTED: probable RNA-binding protein 18-l...   115   4e-24

>ref|XP_002513659.1| conserved hypothetical protein [Ricinus communis]
           gi|223547567|gb|EEF49062.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 170

 Score =  124 bits (310), Expect = 1e-26
 Identities = 58/68 (85%), Positives = 64/68 (94%)
 Frame = -1

Query: 204 KDNNIIFDEKSESRLYVGNLDLRITEAALIKMFSPFGKIVFEDFLWHTRGPKRGEPRGYA 25
           +D+N   DEK+ES+LYVGNLDLRITEAALIKMFSP+GKIV EDFLWHTRGPKRGEPRG+A
Sbjct: 2   QDSNGFIDEKAESKLYVGNLDLRITEAALIKMFSPYGKIVSEDFLWHTRGPKRGEPRGFA 61

Query: 24  FVQFSTKE 1
           FVQFSTKE
Sbjct: 62  FVQFSTKE 69


>ref|XP_004145899.1| PREDICTED: probable RNA-binding protein 18-like [Cucumis sativus]
           gi|449497265|ref|XP_004160356.1| PREDICTED: probable
           RNA-binding protein 18-like [Cucumis sativus]
          Length = 171

 Score =  117 bits (293), Expect = 1e-24
 Identities = 52/67 (77%), Positives = 62/67 (92%)
 Frame = -1

Query: 201 DNNIIFDEKSESRLYVGNLDLRITEAALIKMFSPFGKIVFEDFLWHTRGPKRGEPRGYAF 22
           D+N   DEK ES+LY+GNLDLRITEAALIK+FSPFGKI+ EDFLWHTRGPKRGEPRG+AF
Sbjct: 2   DSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFAF 61

Query: 21  VQFSTKE 1
           +++S+KE
Sbjct: 62  IEYSSKE 68


>emb|CBI22666.3| unnamed protein product [Vitis vinifera]
          Length = 188

 Score =  115 bits (289), Expect = 3e-24
 Identities = 54/79 (68%), Positives = 64/79 (81%)
 Frame = -1

Query: 237 DCHQDHFL*MEKDNNIIFDEKSESRLYVGNLDLRITEAALIKMFSPFGKIVFEDFLWHTR 58
           +CHQ   L    D N + D+K E RL++GNLD R++E ALIKMFSPFGKIV EDF+WHTR
Sbjct: 8   NCHQIDCLCSIMDPNSLTDKKCECRLFIGNLDKRVSEVALIKMFSPFGKIVGEDFMWHTR 67

Query: 57  GPKRGEPRGYAFVQFSTKE 1
           GPKRGEPRG+AFV+FSTKE
Sbjct: 68  GPKRGEPRGFAFVEFSTKE 86


>ref|XP_003549030.1| PREDICTED: probable RNA-binding protein 18-like [Glycine max]
          Length = 212

 Score =  115 bits (288), Expect = 4e-24
 Identities = 50/61 (81%), Positives = 59/61 (96%)
 Frame = -1

Query: 183 DEKSESRLYVGNLDLRITEAALIKMFSPFGKIVFEDFLWHTRGPKRGEPRGYAFVQFSTK 4
           D++ ESRLY+GNLDLRITEAAL+KMFSP+GKI+ EDFLWHTRGPKRGEPRG+AF+Q+STK
Sbjct: 61  DDRGESRLYIGNLDLRITEAALLKMFSPYGKIISEDFLWHTRGPKRGEPRGFAFIQYSTK 120

Query: 3   E 1
           E
Sbjct: 121 E 121


>ref|XP_003533164.1| PREDICTED: probable RNA-binding protein 18-like [Glycine max]
          Length = 157

 Score =  115 bits (288), Expect = 4e-24
 Identities = 50/61 (81%), Positives = 59/61 (96%)
 Frame = -1

Query: 183 DEKSESRLYVGNLDLRITEAALIKMFSPFGKIVFEDFLWHTRGPKRGEPRGYAFVQFSTK 4
           D++ ESRLY+GNLDLRITEAAL+KMFSP+GKI+ EDFLWHTRGPKRGEPRG+AF+Q+STK
Sbjct: 6   DDRGESRLYIGNLDLRITEAALLKMFSPYGKIISEDFLWHTRGPKRGEPRGFAFIQYSTK 65

Query: 3   E 1
           E
Sbjct: 66  E 66


Top