BLASTX nr result

ID: Atractylodes22_contig00047505 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00047505
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001131826.1| uncharacterized protein LOC100193200 [Zea ma...    94   9e-18
ref|XP_003628788.1| Zinc finger CCCH domain-containing protein [...    94   9e-18
ref|XP_002304341.1| predicted protein [Populus trichocarpa] gi|2...    93   2e-17
ref|XP_002527651.1| nucleic acid binding protein, putative [Rici...    92   4e-17
ref|XP_002326730.1| predicted protein [Populus trichocarpa] gi|2...    91   7e-17

>ref|NP_001131826.1| uncharacterized protein LOC100193200 [Zea mays]
           gi|194692650|gb|ACF80409.1| unknown [Zea mays]
           gi|195628590|gb|ACG36125.1| zinc finger C-x8-C-x5-C-x3-H
           type family protein [Zea mays]
           gi|224031423|gb|ACN34787.1| unknown [Zea mays]
           gi|407232606|gb|AFT82645.1| C3H31 transcription factor,
           partial [Zea mays subsp. mays]
           gi|413917333|gb|AFW57265.1| putative Zinc finger
           C-x8-C-x5-C-x3-H type family protein [Zea mays]
           gi|413917334|gb|AFW57266.1| putative Zinc finger
           C-x8-C-x5-C-x3-H type family protein [Zea mays]
          Length = 359

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 56/127 (44%), Positives = 71/127 (55%), Gaps = 24/127 (18%)
 Frame = -1

Query: 419 KRLSWKTRICNKWE*TAYCPHGSKCTFAHGATELQRYGGGLLYPE-----AMPSNVVA-- 261
           K  +WKTRICNKWE T YCP GSKC FAHG+TEL +YGGGL+  +     + P +  A  
Sbjct: 234 KPSNWKTRICNKWEMTGYCPFGSKCHFAHGSTELHKYGGGLVDIDGRDILSTPDSKQAGG 293

Query: 260 -ASGPSLARAGGSELPPG---------------TTQRSLETWNKVNRFWKG-RKINGIYG 132
            A  P  + A  + LPP                 +QRS +    + + WKG  KI+ IYG
Sbjct: 294 SAKAPLESAAASTALPPHADVYHLGIQSQRSAIASQRSGQLQRPIQK-WKGPDKISRIYG 352

Query: 131 DWIDDNE 111
           DWID+NE
Sbjct: 353 DWIDENE 359


>ref|XP_003628788.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|355522810|gb|AET03264.1| Zinc finger CCCH
           domain-containing protein [Medicago truncatula]
          Length = 376

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 59/124 (47%), Positives = 69/124 (55%), Gaps = 21/124 (16%)
 Frame = -1

Query: 419 KRLSWKTRICNKWE*TAYCPHGSKCTFAHGATELQRYGGGLLYPEAMPSNVVAASG---- 252
           K  +WKTRICNKWE T YCP G+KC FAHGATEL RYGGGL+  E+     V AS     
Sbjct: 253 KPSNWKTRICNKWEMTGYCPFGNKCHFAHGATELHRYGGGLMEGESRDGVSVVASDTKQG 312

Query: 251 -PSLARAG---GSELPPGT--------TQR----SLETWNKVNRFWKG-RKINGIYGDWI 123
            PS   A     S  P G+        +QR    S     + ++ WKG  KI+ IYGDWI
Sbjct: 313 VPSKTHADNVVASNPPIGSDVYHLGVPSQRPSIVSQRPGQRAHQKWKGPDKISRIYGDWI 372

Query: 122 DDNE 111
           DD E
Sbjct: 373 DDFE 376


>ref|XP_002304341.1| predicted protein [Populus trichocarpa] gi|222841773|gb|EEE79320.1|
           predicted protein [Populus trichocarpa]
          Length = 371

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 58/129 (44%), Positives = 70/129 (54%), Gaps = 26/129 (20%)
 Frame = -1

Query: 419 KRLSWKTRICNKWE*TAYCPHGSKCTFAHGATELQRYGGGLLYPEAMPSNVVAASGPSLA 240
           K  +WKTRICNKWE T YCP G+KC FAHG  EL RYGGGL+  EA  S+ V    P  +
Sbjct: 247 KPSNWKTRICNKWELTGYCPFGNKCHFAHGVGELHRYGGGLVDTEAKDSSSV----PVES 302

Query: 239 RAGG--SELPPGT-------------------TQRS----LETWNKVNRFWKG-RKINGI 138
           + GG  S+ PP T                   +QRS      +  + +  WKG  KI+ I
Sbjct: 303 KQGGMPSKTPPETAVASVTSVPHSDVYHLGVSSQRSSILIQRSGQRTHEKWKGPDKISRI 362

Query: 137 YGDWIDDNE 111
           YGDWIDD E
Sbjct: 363 YGDWIDDIE 371


>ref|XP_002527651.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223532956|gb|EEF34722.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 349

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 53/125 (42%), Positives = 68/125 (54%), Gaps = 22/125 (17%)
 Frame = -1

Query: 419 KRLSWKTRICNKWE*TAYCPHGSKCTFAHGATELQRYGGGLLYPEA-------------- 282
           K  +WKTRICNKWE T YCP G+KC FAHGA EL RYGGGL+  E               
Sbjct: 225 KPSNWKTRICNKWELTGYCPFGNKCHFAHGAAELHRYGGGLMESEGKDPSSVPADTKQGG 284

Query: 281 ----MPSNVVAASGPSLARAGGSELPPGTTQRSL---ETWNKVNRFWKG-RKINGIYGDW 126
                P+++V AS  S+  +    L   + + S+       + ++ WKG  KI+ IYGDW
Sbjct: 285 VLSKTPADIVVASVASVPHSDVYHLGVPSQRPSILMQRPGQRSHQKWKGPDKISRIYGDW 344

Query: 125 IDDNE 111
           IDD E
Sbjct: 345 IDDIE 349


>ref|XP_002326730.1| predicted protein [Populus trichocarpa] gi|222834052|gb|EEE72529.1|
           predicted protein [Populus trichocarpa]
          Length = 372

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 55/129 (42%), Positives = 68/129 (52%), Gaps = 26/129 (20%)
 Frame = -1

Query: 419 KRLSWKTRICNKWE*TAYCPHGSKCTFAHGATELQRYGGGLLYPEAMPSNVVAASGPSLA 240
           K  +WKTRICNKWE T YCP G+KC FAHG  EL RYGGGL+  +A  S  V    P  +
Sbjct: 248 KPSNWKTRICNKWELTGYCPFGNKCHFAHGVGELHRYGGGLVEMDAKDSAFV----PVES 303

Query: 239 RAGG--SELPPGTTQRSLET-----------------------WNKVNRFWKG-RKINGI 138
           + GG  S+ PP T   S+ +                         + ++ WKG  KI+ I
Sbjct: 304 KQGGVPSKTPPETVVASVTSVPNSDVYHLGVPSQKSSILIQRPGQRTHQKWKGPDKISRI 363

Query: 137 YGDWIDDNE 111
           YGDWIDD E
Sbjct: 364 YGDWIDDIE 372


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