BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00047474
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containi...   150   8e-35
ref|XP_002305605.1| predicted protein [Populus trichocarpa] gi|2...   141   6e-32
ref|XP_002518527.1| pentatricopeptide repeat-containing protein,...   138   5e-31
sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-c...   122   2e-26
ref|NP_193849.2| pentatricopeptide repeat-containing protein [Ar...    85   5e-15

>ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21170-like [Vitis vinifera]
          Length = 569

 Score =  150 bits (380), Expect = 8e-35
 Identities = 71/148 (47%), Positives = 104/148 (70%)
 Frame = +1

Query: 4   LSKYITSHCKKHRWKVAEELAHLAFQESIFLEPSCCGYLVKHYCKRAEIDLAINMHEQLE 183
           LSK+ITS CK  RW  A++L ++  ++ +  +  CC  LV+HYC+  +ID +I +HE+++
Sbjct: 422 LSKFITSLCKNGRWTEADDLLNVTIEKGLLPDSFCCSALVEHYCRSRQIDSSIALHEKIK 481

Query: 184 KKELGLDSRTYCVLLSGLMGVLRLKEAERIFDYMRMKNLVTSESFVIMINGFCHENELKK 363
           K +  LD  TY VLL+GL    R+++A  +FD MR +NL++S SF IM++G C E EL+K
Sbjct: 482 KVKGSLDVATYNVLLNGLFMEKRIEDAVSVFDCMRSQNLLSSTSFTIMVSGLCRERELRK 541

Query: 364 AMKLHNEMVETGLKPSVKTYKRLISNFR 447
           AMK H+EM++ GLKP   TYKRLIS F+
Sbjct: 542 AMKFHDEMLKMGLKPDRATYKRLISGFK 569


>ref|XP_002305605.1| predicted protein [Populus trichocarpa] gi|222848569|gb|EEE86116.1|
           predicted protein [Populus trichocarpa]
          Length = 564

 Score =  141 bits (355), Expect = 6e-32
 Identities = 68/147 (46%), Positives = 94/147 (63%)
 Frame = +1

Query: 4   LSKYITSHCKKHRWKVAEELAHLAFQESIFLEPSCCGYLVKHYCKRAEIDLAINMHEQLE 183
           LSK+I    +K RW+  E+L  L  ++ +  +  CC  LV+HYC R +ID A+ +H ++E
Sbjct: 416 LSKFILLLSRKRRWREVEDLLDLVLEKGLLPDSLCCCSLVEHYCSRRQIDKAVALHNKME 475

Query: 184 KKELGLDSRTYCVLLSGLMGVLRLKEAERIFDYMRMKNLVTSESFVIMINGFCHENELKK 363
           K +  LD  TY +LL GL+   R++E  R+FDYM+   LV SESF I I G C   E++K
Sbjct: 476 KLQASLDVATYNILLDGLVKNGRIEEVVRVFDYMKGLKLVNSESFTITIRGLCRAKEMRK 535

Query: 364 AMKLHNEMVETGLKPSVKTYKRLISNF 444
           AMKLH+EM++ GLKP    YKRLI  F
Sbjct: 536 AMKLHDEMLDMGLKPDKAAYKRLILEF 562


>ref|XP_002518527.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542372|gb|EEF43914.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 599

 Score =  138 bits (347), Expect = 5e-31
 Identities = 69/148 (46%), Positives = 93/148 (62%)
 Frame = +1

Query: 1   ALSKYITSHCKKHRWKVAEELAHLAFQESIFLEPSCCGYLVKHYCKRAEIDLAINMHEQL 180
           +LSKYIT  CKK RWK AEEL ++  ++ +  +      LVKHYC   + D A+ +H  L
Sbjct: 444 SLSKYITLLCKKRRWKEAEELLYMVLEKGLLPDTLSFCSLVKHYCSSKQTDKALALHNTL 503

Query: 181 EKKELGLDSRTYCVLLSGLMGVLRLKEAERIFDYMRMKNLVTSESFVIMINGFCHENELK 360
           EK +  LD   Y +LL GL+   R++E+ ++FDYM+   L  S SF ++I G C   EL+
Sbjct: 504 EKLQASLDITAYNLLLGGLVKEGRVEESIKVFDYMKGLKLANSASFTVIIRGLCRAKELR 563

Query: 361 KAMKLHNEMVETGLKPSVKTYKRLISNF 444
           KAMKLH+EM+  GLKP   TYKRLI  F
Sbjct: 564 KAMKLHDEMLNMGLKPDKPTYKRLILEF 591


>sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21170
          Length = 585

 Score =  122 bits (307), Expect = 2e-26
 Identities = 60/150 (40%), Positives = 94/150 (62%), Gaps = 2/150 (1%)
 Frame = +1

Query: 4   LSKYITSHCKKHRWKVAEELAHLAFQESIFLEPSCCGYLVKHYCKRAEIDLAINMHEQLE 183
           LS+ + S C+K RWK AE+L     +  ++ +   CG L++ YC+  +++ A+ +HE+++
Sbjct: 436 LSEVLASMCRKRRWKSAEKLLDSVMEMEVYFDSFACGLLMERYCRSGKLEKALVLHEKIK 495

Query: 184 KKELGLDSRTYCVLLSGLMGVLR--LKEAERIFDYMRMKNLVTSESFVIMINGFCHENEL 357
           K +  LD   Y  +L  LM   +  ++EA  +F+YM+  N V S+SF IMI G C   E+
Sbjct: 496 KMKGSLDVNAYNAVLDRLMMRQKEMVEEAVVVFEYMKEINSVNSKSFTIMIQGLCRVKEM 555

Query: 358 KKAMKLHNEMVETGLKPSVKTYKRLISNFR 447
           KKAM+ H+EM+  GLKP + TYKRLI  F+
Sbjct: 556 KKAMRSHDEMLRLGLKPDLVTYKRLILGFK 585


>ref|NP_193849.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|332659015|gb|AEE84415.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 551

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 44/106 (41%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
 Frame = +1

Query: 136 KRAEIDLAINMHEQLEKKELGLDSRTYCVLLSGLMGVLR--LKEAERIFDYMRMKNLVTS 309
           +  +++ A+ +HE+++K +  LD   Y  +L  LM   +  ++EA  +F+YM+  N V S
Sbjct: 446 RSGKLEKALVLHEKIKKMKGSLDVNAYNAVLDRLMMRQKEMVEEAVVVFEYMKEINSVNS 505

Query: 310 ESFVIMINGFCHENELKKAMKLHNEMVETGLKPSVKTYKRLISNFR 447
           +SF IMI G C   E+KKAM+ H+EM+  GLKP + TYKRLI  F+
Sbjct: 506 KSFTIMIQGLCRVKEMKKAMRSHDEMLRLGLKPDLVTYKRLILGFK 551