BLASTX nr result

ID: Atractylodes22_contig00047471 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00047471
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD99221.1| polypepetide with reverse transcriptase and RNas...   104   8e-21
gb|ABM05483.1| LTR retrotransposon-like protein [Rhodiola fastig...   102   3e-20
emb|CAN69190.1| hypothetical protein VITISV_001578 [Vitis vinifera]   100   2e-19
emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]   100   2e-19
emb|CAN69838.1| hypothetical protein VITISV_008389 [Vitis vinifera]    99   4e-19

>dbj|BAD99221.1| polypepetide with reverse transcriptase and RNaseH domains [Petunia
           x hybrida]
          Length = 389

 Score =  104 bits (259), Expect = 8e-21
 Identities = 49/92 (53%), Positives = 62/92 (67%)
 Frame = +2

Query: 2   SDWASCPYTRRXXXXXXXXXXXXXXXWKSKKQLTVSLSSAEAEFRSMRRITTELTWLSRL 181
           +DWASCP +RR               WKSKKQ  VSLSSAEAE+RS+RR+  E+ W+ RL
Sbjct: 234 ADWASCPDSRRSISGFFLTMGGCPLSWKSKKQQVVSLSSAEAEYRSLRRLVAEIAWIVRL 293

Query: 182 LTDLGVENITPIALKCDNLASIHIANNPVFHE 277
           L DL V+   P+++ CDN ++IHIA NPVFHE
Sbjct: 294 LHDLSVDFSLPVSVHCDNQSAIHIAKNPVFHE 325


>gb|ABM05483.1| LTR retrotransposon-like protein [Rhodiola fastigiata]
          Length = 383

 Score =  102 bits (254), Expect = 3e-20
 Identities = 49/92 (53%), Positives = 61/92 (66%)
 Frame = +2

Query: 2   SDWASCPYTRRXXXXXXXXXXXXXXXWKSKKQLTVSLSSAEAEFRSMRRITTELTWLSRL 181
           +DW SCP TRR               WK+KKQ  VS SSAEAE+R+M     E++WL+RL
Sbjct: 245 ADWGSCPLTRRSVSGCCVLLGQSVISWKTKKQAIVSRSSAEAEYRAMAHACCEVSWLTRL 304

Query: 182 LTDLGVENITPIALKCDNLASIHIANNPVFHE 277
           L DL V+  TP+AL CDN+A++HIA NPVFHE
Sbjct: 305 LADLQVQVPTPVALFCDNMAAMHIARNPVFHE 336


>emb|CAN69190.1| hypothetical protein VITISV_001578 [Vitis vinifera]
          Length = 1323

 Score =  100 bits (248), Expect = 2e-19
 Identities = 51/92 (55%), Positives = 58/92 (63%)
 Frame = +2

Query: 2    SDWASCPYTRRXXXXXXXXXXXXXXXWKSKKQLTVSLSSAEAEFRSMRRITTELTWLSRL 181
            SDWA CP TRR               W+SK+Q TVSLSSAEAE+R+M     ELTWL  L
Sbjct: 1171 SDWAGCPLTRRSTTGYCVFLGPSLISWRSKRQKTVSLSSAEAEYRAMTGACCELTWLRYL 1230

Query: 182  LTDLGVENITPIALKCDNLASIHIANNPVFHE 277
            L DLGV +  P  L CDN A++HIA NPVFHE
Sbjct: 1231 LKDLGVLHKEPALLYCDNKAALHIAANPVFHE 1262


>emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]
          Length = 1498

 Score =  100 bits (248), Expect = 2e-19
 Identities = 51/92 (55%), Positives = 58/92 (63%)
 Frame = +2

Query: 2    SDWASCPYTRRXXXXXXXXXXXXXXXWKSKKQLTVSLSSAEAEFRSMRRITTELTWLSRL 181
            SDWA CP TRR               W+SK+Q TVSLSSAEAE+R+M     ELTWL  L
Sbjct: 1346 SDWAGCPLTRRSTTGYCVFLGPSLISWRSKRQKTVSLSSAEAEYRAMTGACCELTWLRYL 1405

Query: 182  LTDLGVENITPIALKCDNLASIHIANNPVFHE 277
            L DLGV +  P  L CDN A++HIA NPVFHE
Sbjct: 1406 LKDLGVLHKEPALLYCDNKAALHIAANPVFHE 1437


>emb|CAN69838.1| hypothetical protein VITISV_008389 [Vitis vinifera]
          Length = 336

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 50/92 (54%), Positives = 58/92 (63%)
 Frame = +2

Query: 2   SDWASCPYTRRXXXXXXXXXXXXXXXWKSKKQLTVSLSSAEAEFRSMRRITTELTWLSRL 181
           SDWASCP TRR               WKSK+Q T+SLSS +AE+R+M     ELTWL  L
Sbjct: 184 SDWASCPLTRRSTIGYCVFLGPSLISWKSKRQKTMSLSSVKAEYRAMIGTCCELTWLRYL 243

Query: 182 LTDLGVENITPIALKCDNLASIHIANNPVFHE 277
           L DLGV +  P  L CDN A++HIA NPVFHE
Sbjct: 244 LRDLGVLHQEPALLHCDNKAALHIATNPVFHE 275


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