BLASTX nr result

ID: Atractylodes22_contig00047423 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00047423
         (209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P93779.1|RL5_SOLME RecName: Full=60S ribosomal protein L5 gi|...    53   4e-10
gb|ADR71226.1| 60S ribosomal protein L5B [Hevea brasiliensis]          52   7e-10
gb|ADR71225.1| 60S ribosomal protein L5A [Hevea brasiliensis]          52   7e-10
ref|XP_002265940.2| PREDICTED: 60S ribosomal protein L5-like [Vi...    53   2e-09
ref|XP_003551526.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosoma...    50   4e-09

>sp|P93779.1|RL5_SOLME RecName: Full=60S ribosomal protein L5 gi|1881380|dbj|BAA19415.1|
           ribosomal protein L5 [Solanum melongena]
          Length = 121

 Score = 52.8 bits (125), Expect(2) = 4e-10
 Identities = 25/42 (59%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
 Frame = -1

Query: 125 TRFSEYVEPAI-PDNIEGLYKKVHAAICVAPNPMKSEKQPPK 3
           + FS Y++  + PDNIE +YKKVHAAI   P+P KS+KQPPK
Sbjct: 39  SHFSSYIKADLAPDNIEEMYKKVHAAIRPDPSPKKSQKQPPK 80



 Score = 36.2 bits (82), Expect(2) = 4e-10
 Identities = 18/24 (75%), Positives = 18/24 (75%), Gaps = 3/24 (12%)
 Frame = -3

Query: 183 YIYGGHVAAYMR---EDELEKYHS 121
           YIYGGHVAAYM    EDE EKY S
Sbjct: 16  YIYGGHVAAYMNILMEDEPEKYQS 39


>gb|ADR71226.1| 60S ribosomal protein L5B [Hevea brasiliensis]
          Length = 298

 Score = 51.6 bits (122), Expect(2) = 7e-10
 Identities = 26/40 (65%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
 Frame = -1

Query: 119 FSEYVEPAI-PDNIEGLYKKVHAAICVAPNPMKSEKQPPK 3
           FSEY++  I PD++E LYKKVHAAI   P   KSEKQPPK
Sbjct: 222 FSEYIKRGIEPDDMEELYKKVHAAIRADPTAKKSEKQPPK 261



 Score = 36.6 bits (83), Expect(2) = 7e-10
 Identities = 18/22 (81%), Positives = 18/22 (81%), Gaps = 3/22 (13%)
 Frame = -3

Query: 183 YIYGGHVAAYMR---EDELEKY 127
           YIYGGHVAAYMR   EDE EKY
Sbjct: 197 YIYGGHVAAYMRTLMEDEPEKY 218


>gb|ADR71225.1| 60S ribosomal protein L5A [Hevea brasiliensis]
          Length = 298

 Score = 51.6 bits (122), Expect(2) = 7e-10
 Identities = 26/40 (65%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
 Frame = -1

Query: 119 FSEYVEPAI-PDNIEGLYKKVHAAICVAPNPMKSEKQPPK 3
           FSEY++  I PD++E LYKKVHAAI   P   KSEKQPPK
Sbjct: 222 FSEYIKRGIEPDDMEELYKKVHAAIRADPTAKKSEKQPPK 261



 Score = 36.6 bits (83), Expect(2) = 7e-10
 Identities = 18/22 (81%), Positives = 18/22 (81%), Gaps = 3/22 (13%)
 Frame = -3

Query: 183 YIYGGHVAAYMR---EDELEKY 127
           YIYGGHVAAYMR   EDE EKY
Sbjct: 197 YIYGGHVAAYMRMLMEDEPEKY 218


>ref|XP_002265940.2| PREDICTED: 60S ribosomal protein L5-like [Vitis vinifera]
          Length = 262

 Score = 52.8 bits (125), Expect(2) = 2e-09
 Identities = 25/42 (59%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
 Frame = -1

Query: 125 TRFSEYVEPAI-PDNIEGLYKKVHAAICVAPNPMKSEKQPPK 3
           + FSEY++  I PD IE +YKKVHA+I   P P KSEK+PPK
Sbjct: 181 SHFSEYIKRGIEPDGIEEMYKKVHASIRADPTPKKSEKEPPK 222



 Score = 34.3 bits (77), Expect(2) = 2e-09
 Identities = 17/24 (70%), Positives = 18/24 (75%), Gaps = 3/24 (12%)
 Frame = -3

Query: 183 YIYGGHVAAYM---REDELEKYHS 121
           YI+GGHVAAYM    EDE EKY S
Sbjct: 158 YIFGGHVAAYMTTLMEDEPEKYQS 181


>ref|XP_003551526.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L5-like
           [Glycine max]
          Length = 230

 Score = 50.4 bits (119), Expect(2) = 4e-09
 Identities = 24/41 (58%), Positives = 28/41 (68%)
 Frame = -1

Query: 125 TRFSEYVEPAIPDNIEGLYKKVHAAICVAPNPMKSEKQPPK 3
           + FSEY++  I   IE LYKKVHAAI   P   KS+KQPPK
Sbjct: 149 SHFSEYIKRGIEXGIEALYKKVHAAIRADPTLKKSDKQPPK 189



 Score = 35.0 bits (79), Expect(2) = 4e-09
 Identities = 16/24 (66%), Positives = 19/24 (79%), Gaps = 3/24 (12%)
 Frame = -3

Query: 183 YIYGGHVAAYMR---EDELEKYHS 121
           Y++GGHVAAYM+   EDE EKY S
Sbjct: 126 YVFGGHVAAYMKILAEDEPEKYQS 149


Top