BLASTX nr result

ID: Atractylodes22_contig00047408 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00047408
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ90067.1| predicted protein [Hordeum vulgare subsp. vulgare]     73   3e-11
ref|XP_002440048.1| hypothetical protein SORBIDRAFT_09g025030 [S...    70   2e-10
ref|XP_003568149.1| PREDICTED: pseudouridylate synthase 7 homolo...    69   3e-10
emb|CBI34194.3| unnamed protein product [Vitis vinifera]               69   3e-10
ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synt...    69   3e-10

>dbj|BAJ90067.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 700

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 47/107 (43%), Positives = 56/107 (52%), Gaps = 18/107 (16%)
 Frame = -1

Query: 269 SITSMTGAYRRVFGKAKDFEWELIKYTDVSIPLTITDLDIFTKAK------------EGN 126
           SITSM G YRRVF K  DFEWEL+ YTD S  L  TDLDI +K K             GN
Sbjct: 564 SITSMKGGYRRVFQKPIDFEWELMTYTDDSASLAETDLDILSKGKLTEAKVANEPAPSGN 623

Query: 125 IA------RKETEIDVSTPNGEAILQENESSSVSSAPGEQLALKLSF 3
            A      + E  ++ S P  E  L EN+S   S     +LA+KL+F
Sbjct: 624 SASNPPDCKLEEPLETSMPTSETSLVENKSIGSSDTLPSKLAVKLAF 670


>ref|XP_002440048.1| hypothetical protein SORBIDRAFT_09g025030 [Sorghum bicolor]
           gi|241945333|gb|EES18478.1| hypothetical protein
           SORBIDRAFT_09g025030 [Sorghum bicolor]
          Length = 647

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 44/98 (44%), Positives = 56/98 (57%), Gaps = 9/98 (9%)
 Frame = -1

Query: 269 SITSMTGAYRRVFGKAKDFEWELIKYTDVSIPLTITDLDIF--TKAKEGN-IARKETE-- 105
           SITSM G YRRVF +   FEWEL+ YTD S  L  TDLD+   TK KE N ++ +E++  
Sbjct: 520 SITSMKGGYRRVFQRPIGFEWELMTYTDDSSSLAETDLDVLSRTKPKEANELSNQESQDK 579

Query: 104 ----IDVSTPNGEAILQENESSSVSSAPGEQLALKLSF 3
                D S P   +  QEN+         E+LALKL+F
Sbjct: 580 LEKAPDTSVPTNRSSSQENKLIGCPDTSPEKLALKLAF 617


>ref|XP_003568149.1| PREDICTED: pseudouridylate synthase 7 homolog [Brachypodium
           distachyon]
          Length = 693

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 42/106 (39%), Positives = 57/106 (53%), Gaps = 17/106 (16%)
 Frame = -1

Query: 269 SITSMTGAYRRVFGKAKDFEWELIKYTDVSIPLTITDLDIFTKAK--------------- 135
           SIT+M G+YRRVF +  DFEWEL+KYTD S  L  TD+DI +K K               
Sbjct: 558 SITNMKGSYRRVFQRPIDFEWELMKYTDESASLAETDMDILSKVKLTEAKANEPGSSGVS 617

Query: 134 --EGNIARKETEIDVSTPNGEAILQENESSSVSSAPGEQLALKLSF 3
             +    + E+  + S P  E  L EN+S+  S     +LA+KL+F
Sbjct: 618 NSKPADCKLESPSENSMPTSETSLGENKSNGSSDISPSKLAVKLAF 663


>emb|CBI34194.3| unnamed protein product [Vitis vinifera]
          Length = 693

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 50/117 (42%), Positives = 62/117 (52%), Gaps = 28/117 (23%)
 Frame = -1

Query: 269 SITSMTGAYRRVFGKAKDFEWELIKYTDVSIPLTITDLDIFTKAKEGNI----------- 123
           SIT+MTG +RRVF K  DFEWEL+ YT+ +IPL  TD D  TK+K  NI           
Sbjct: 545 SITNMTGGFRRVFQKPIDFEWELLTYTEGNIPLAETDWDKITKSKPSNIIGGEDSRNGNE 604

Query: 122 ------ARKETE-----IDVST----PNG--EAILQENESSSVSSAPGEQLALKLSF 3
                   K++E     +++ST    PNG  E  L + E    S AP  Q ALKLSF
Sbjct: 605 KENSFQCMKQSESFEHNVNLSTDNNEPNGVTEIGLPQVEPQFESGAPEAQRALKLSF 661


>ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Vitis
           vinifera]
          Length = 694

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 50/117 (42%), Positives = 62/117 (52%), Gaps = 28/117 (23%)
 Frame = -1

Query: 269 SITSMTGAYRRVFGKAKDFEWELIKYTDVSIPLTITDLDIFTKAKEGNI----------- 123
           SIT+MTG +RRVF K  DFEWEL+ YT+ +IPL  TD D  TK+K  NI           
Sbjct: 546 SITNMTGGFRRVFQKPIDFEWELLTYTEGNIPLAETDWDKITKSKPSNIIGGEDSRNGNE 605

Query: 122 ------ARKETE-----IDVST----PNG--EAILQENESSSVSSAPGEQLALKLSF 3
                   K++E     +++ST    PNG  E  L + E    S AP  Q ALKLSF
Sbjct: 606 KENSFQCMKQSESFEHNVNLSTDNNEPNGVTEIGLPQVEPQFESGAPEAQRALKLSF 662


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