BLASTX nr result

ID: Atractylodes22_contig00047387 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00047387
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus]        100   2e-19
emb|CAN78666.1| hypothetical protein VITISV_032507 [Vitis vinifera]    56   3e-06
emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]    56   3e-06
emb|CAN82637.1| hypothetical protein VITISV_028818 [Vitis vinifera]    56   4e-06
emb|CAN66959.1| hypothetical protein VITISV_013138 [Vitis vinifera]    56   4e-06

>emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus]
          Length = 1358

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 48/64 (75%), Positives = 55/64 (85%), Gaps = 1/64 (1%)
 Frame = -3

Query: 190 YVVCSISLWHKRLAHTNIKNTEKIQTKRMLKADNKDFGKCETYTKSKFTKKPFPSV-E*N 14
           Y+ CSISLWHKRLAHTNIKN EK+QTK +LK ++KDF KCET  KSKFTKKPFPSV + N
Sbjct: 487 YIACSISLWHKRLAHTNIKNIEKMQTKGLLKLNDKDFEKCETCVKSKFTKKPFPSVPKRN 546

Query: 13  TSML 2
           TS+L
Sbjct: 547 TSLL 550


>emb|CAN78666.1| hypothetical protein VITISV_032507 [Vitis vinifera]
          Length = 804

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/59 (44%), Positives = 36/59 (61%)
 Frame = -3

Query: 178 SISLWHKRLAHTNIKNTEKIQTKRMLKADNKDFGKCETYTKSKFTKKPFPSVE*NTSML 2
           S+ LWH RLAH  +   ++I    ++  D K F KCE   KSK  KKPF SVE ++++L
Sbjct: 439 SLXLWHNRLAHVGLSTIKRIVKCGLIACDTKKFEKCEICVKSKMIKKPFHSVERSSNLL 497


>emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]
          Length = 1473

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/59 (44%), Positives = 36/59 (61%)
 Frame = -3

Query: 178 SISLWHKRLAHTNIKNTEKIQTKRMLKADNKDFGKCETYTKSKFTKKPFPSVE*NTSML 2
           S+ LWH RLAH  +   ++I    ++  D K F KCE   KSK  KKPF SVE ++++L
Sbjct: 439 SLXLWHNRLAHVGLSTIKRIVKCGLIACDTKKFEKCEICVKSKMIKKPFHSVERSSNLL 497


>emb|CAN82637.1| hypothetical protein VITISV_028818 [Vitis vinifera]
          Length = 1114

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 26/59 (44%), Positives = 36/59 (61%)
 Frame = -3

Query: 178 SISLWHKRLAHTNIKNTEKIQTKRMLKADNKDFGKCETYTKSKFTKKPFPSVE*NTSML 2
           S+ LWH RLAH  +   ++I    ++  D K F KCE   KSK  KKPF SVE ++++L
Sbjct: 329 SLILWHNRLAHVGLSTIKRIVKCGLIACDTKKFEKCEICVKSKMIKKPFHSVERSSNLL 387


>emb|CAN66959.1| hypothetical protein VITISV_013138 [Vitis vinifera]
          Length = 1234

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 26/59 (44%), Positives = 36/59 (61%)
 Frame = -3

Query: 178 SISLWHKRLAHTNIKNTEKIQTKRMLKADNKDFGKCETYTKSKFTKKPFPSVE*NTSML 2
           S+ LWH RLAH  +   ++I    ++  D K F KCE   KSK  KKPF SVE ++++L
Sbjct: 439 SLFLWHNRLAHVGLSTIKRIVKCGLIACDTKKFEKCEICVKSKMIKKPFHSVERSSNLL 497


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