BLASTX nr result

ID: Atractylodes22_contig00047340 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00047340
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17575.3| unnamed protein product [Vitis vinifera]               68   9e-10
ref|XP_004165472.1| PREDICTED: pentatricopeptide repeat-containi...    62   4e-08
ref|XP_004148464.1| PREDICTED: pentatricopeptide repeat-containi...    62   4e-08

>emb|CBI17575.3| unnamed protein product [Vitis vinifera]
          Length = 656

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 34/73 (46%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
 Frame = -2

Query: 216 DSPFCYGNTVVNCFHSQTQFKRNKPIKQITRKFKK-TNKSNVDENVVNPRVYMKDAIRNI 40
           D  F Y  + +   HS  QF++ KP+++ ++KF+K T K NVD      ++YM+D I NI
Sbjct: 80  DRAFGYWKSSIRALHSLHQFRQKKPVQRTSQKFRKPTEKENVDH-----KIYMRDTIGNI 134

Query: 39  SNILRYSTWDSAQ 1
           S ILRY TWDSAQ
Sbjct: 135 SKILRYLTWDSAQ 147


>ref|XP_004165472.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g01390-like [Cucumis sativus]
          Length = 737

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 31/67 (46%), Positives = 42/67 (62%)
 Frame = -2

Query: 201 YGNTVVNCFHSQTQFKRNKPIKQITRKFKKTNKSNVDENVVNPRVYMKDAIRNISNILRY 22
           Y N    C HS  Q+KR+KPI + +R+ +K  K    E V+ PR+Y +D +RNI NILR 
Sbjct: 91  YQNISSKCLHSLHQYKRDKPISRFSRQSRKGTKVAKKEEVI-PRLYTRDTVRNICNILRN 149

Query: 21  STWDSAQ 1
            +W SAQ
Sbjct: 150 CSWASAQ 156


>ref|XP_004148464.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g01390-like [Cucumis sativus]
          Length = 1058

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 31/67 (46%), Positives = 42/67 (62%)
 Frame = -2

Query: 201 YGNTVVNCFHSQTQFKRNKPIKQITRKFKKTNKSNVDENVVNPRVYMKDAIRNISNILRY 22
           Y N    C HS  Q+KR+KPI + +R+ +K  K    E V+ PR+Y +D +RNI NILR 
Sbjct: 72  YQNISSKCLHSLHQYKRDKPISRFSRQSRKGTKVAKKEEVI-PRLYTRDTVRNICNILRN 130

Query: 21  STWDSAQ 1
            +W SAQ
Sbjct: 131 CSWASAQ 137


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