BLASTX nr result

ID: Atractylodes22_contig00047294 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00047294
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553022.1| PREDICTED: uncharacterized protein LOC100788...    43   6e-06
gb|ACN78974.1| retrotransposon protein [Glycine max] gi|22501615...    49   8e-06
ref|XP_003635354.1| PREDICTED: uncharacterized protein LOC100854...    45   1e-05

>ref|XP_003553022.1| PREDICTED: uncharacterized protein LOC100788433 [Glycine max]
          Length = 1433

 Score = 43.1 bits (100), Expect(2) = 6e-06
 Identities = 16/46 (34%), Positives = 26/46 (56%)
 Frame = -3

Query: 140 LNKYFAFYNISHELRISMVGFAMKGNALSWFHWMMRNQQFSSWETF 3
           + + F +     E R+++  F + G ALSW+ WM RN   +SW +F
Sbjct: 80  ITQLFEYQGTPEEERVTLASFYLDGPALSWYQWMFRNGFITSWSSF 125



 Score = 31.6 bits (70), Expect(2) = 6e-06
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 7/42 (16%)
 Frame = -2

Query: 231 SHDKPTSQPK-------HPKLVLQTFDGTDVIDWVFHAEQIF 127
           S   P S PK       H K+ +  FDG+D + W+F   Q+F
Sbjct: 43  SSASPVSSPKPPPASRNHVKIDVPRFDGSDPVGWIFKITQLF 84


>gb|ACN78974.1| retrotransposon protein [Glycine max] gi|225016158|gb|ACN78981.1|
           retrotransposon protein [Glycine max]
          Length = 1261

 Score = 48.5 bits (114), Expect(2) = 8e-06
 Identities = 19/46 (41%), Positives = 29/46 (63%)
 Frame = -3

Query: 140 LNKYFAFYNISHELRISMVGFAMKGNALSWFHWMMRNQQFSSWETF 3
           + ++F ++      R+++  F M+G AL+WF WM RN Q SSW TF
Sbjct: 80  ITQFFEYHATPDHERLTIASFYMEGLALAWFQWMHRNGQLSSWSTF 125



 Score = 25.8 bits (55), Expect(2) = 8e-06
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = -2

Query: 234 PSHDKPTSQPKHP-KLVLQTFDGTDVIDWVFHAEQIF 127
           PS    T+ P +  KL +  F+G+D   W+F   Q F
Sbjct: 48  PSPGATTTNPTYRMKLEVSRFNGSDPEGWIFKITQFF 84


>ref|XP_003635354.1| PREDICTED: uncharacterized protein LOC100854728 [Vitis vinifera]
          Length = 2807

 Score = 44.7 bits (104), Expect(2) = 1e-05
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = -3

Query: 140 LNKYFAFYNISHELRISMVGFAMKGNALSWFHWMMRNQQFSSWETF 3
           + ++F F+     LR+ +V F M+G A  W+ WM  N   SSW+ F
Sbjct: 277 VEEFFDFHGTPEPLRLRIVSFHMEGPAAGWYQWMKANNLLSSWKAF 322



 Score = 29.3 bits (64), Expect(2) = 1e-05
 Identities = 24/101 (23%), Positives = 39/101 (38%), Gaps = 12/101 (11%)
 Frame = -2

Query: 393 IASLQAAAIQTQNDQQSITSILHQI-QAQLSTQQPNSSFFHGDSSNPNPNHRTPPSHDKP 217
           +++++A   Q +   +S T   HQI Q  +ST       F       +     PP    P
Sbjct: 181 LSAVKALQDQFEAQFESQTVSFHQILQQYMSTVDSRLEEFRSQFRGSSAGLLGPPPAPPP 240

Query: 216 TSQP-----------KHPKLVLQTFDGTDVIDWVFHAEQIF 127
             +            +  K+ +  F+GTD   WVF  E+ F
Sbjct: 241 VPEMGVGSNELATALRFMKMEIPKFNGTDPHGWVFRVEEFF 281


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