BLASTX nr result

ID: Atractylodes22_contig00047281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00047281
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79540.1| hypothetical protein VITISV_016973 [Vitis vinifera]    67   2e-09
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc...    66   3e-09
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]          66   3e-09
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]            66   3e-09
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...    65   4e-09

>emb|CAN79540.1| hypothetical protein VITISV_016973 [Vitis vinifera]
          Length = 699

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 34/71 (47%), Positives = 43/71 (60%)
 Frame = -2

Query: 282 SVKCVFLGYKPGVKSYKLWCRETRKVIISRDVTFDEDSMLHXXXXXXXXXXTKGDKDTSQ 103
           S+KCV LGYK GVK Y+LWC ET+KVI+SR+V F E  MLH           +  K ++Q
Sbjct: 253 SIKCVILGYKSGVKGYELWCLETKKVIVSRBVIFYETIMLHDSSFRDSCDKEQ-XKSSTQ 311

Query: 102 LEVELPVTSTP 70
           +E E    S P
Sbjct: 312 VEFEFGSRSIP 322


>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1138

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 27/41 (65%), Positives = 33/41 (80%)
 Frame = -2

Query: 282 SVKCVFLGYKPGVKSYKLWCRETRKVIISRDVTFDEDSMLH 160
           ++KC+FLGY  GVK YKLWC ET+KV+ISR+V F E  MLH
Sbjct: 548 AIKCIFLGYPSGVKGYKLWCSETKKVVISRNVVFHESVMLH 588


>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
          Length = 944

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 27/41 (65%), Positives = 33/41 (80%)
 Frame = -2

Query: 282 SVKCVFLGYKPGVKSYKLWCRETRKVIISRDVTFDEDSMLH 160
           ++KC+FLGY  GVK YKLWC ET+KV+ISR+V F E  MLH
Sbjct: 507 AIKCIFLGYSSGVKGYKLWCPETKKVVISRNVVFHESVMLH 547


>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]
          Length = 944

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 27/41 (65%), Positives = 33/41 (80%)
 Frame = -2

Query: 282 SVKCVFLGYKPGVKSYKLWCRETRKVIISRDVTFDEDSMLH 160
           ++KC+FLGY  GVK YKLWC ET+KV+ISR+V F E  MLH
Sbjct: 507 AIKCIFLGYSSGVKGYKLWCPETKKVVISRNVVFHESVMLH 547


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 27/41 (65%), Positives = 33/41 (80%)
 Frame = -2

Query: 282  SVKCVFLGYKPGVKSYKLWCRETRKVIISRDVTFDEDSMLH 160
            ++KC+FLGY  GVK YKLWC ET+KV+ISR+V F E  MLH
Sbjct: 886  AIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVMLH 926


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