BLASTX nr result

ID: Atractylodes22_contig00047253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00047253
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528283.1| pentatricopeptide repeat-containing protein,...   119   2e-25
emb|CBI37903.3| unnamed protein product [Vitis vinifera]              118   6e-25
ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containi...   118   6e-25
ref|NP_179705.1| pentatricopeptide repeat-containing protein [Ar...   106   2e-21
ref|XP_002880355.1| pentatricopeptide repeat-containing protein ...   105   5e-21

>ref|XP_002528283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532320|gb|EEF34121.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 602

 Score =  119 bits (299), Expect = 2e-25
 Identities = 54/79 (68%), Positives = 66/79 (83%)
 Frame = -3

Query: 237 WNNMLSGYAKLRMMKPARSLFDQMQEKDVVSWNTMVIGYAQNGNCDEALKLYKELRMLNI 58
           WN MLSGYAKL  +KPAR LFD+M EKDVVSWNTMVI YA++G C++AL+ Y+ELR L I
Sbjct: 120 WNGMLSGYAKLGKIKPARKLFDKMPEKDVVSWNTMVIAYAKSGFCNDALRFYRELRRLGI 179

Query: 57  GLNEFSFSGVLTVCVKTKE 1
           G NE+SF+G+L +CVK KE
Sbjct: 180 GYNEYSFAGLLNICVKVKE 198



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/71 (40%), Positives = 48/71 (67%)
 Frame = -3

Query: 237 WNNMLSGYAKLRMMKPARSLFDQMQEKDVVSWNTMVIGYAQNGNCDEALKLYKELRMLNI 58
           W  M+SGYA+   ++ AR LFD M EK+ V+W +++ GYA++    +AL+L+ ++  LNI
Sbjct: 252 WTTMVSGYAQWGDVEAARELFDLMPEKNPVAWTSLIAGYARHDLGHKALELFTKMMALNI 311

Query: 57  GLNEFSFSGVL 25
             ++F+FS  L
Sbjct: 312 RPDQFTFSSCL 322


>emb|CBI37903.3| unnamed protein product [Vitis vinifera]
          Length = 516

 Score =  118 bits (295), Expect = 6e-25
 Identities = 58/79 (73%), Positives = 63/79 (79%)
 Frame = -3

Query: 237 WNNMLSGYAKLRMMKPARSLFDQMQEKDVVSWNTMVIGYAQNGNCDEALKLYKELRMLNI 58
           WNNMLSGYAKL M+KPAR LFD+M EKDVVSWNTMVI +AQ G  DEAL+ Y E R L I
Sbjct: 129 WNNMLSGYAKLGMIKPARKLFDKMPEKDVVSWNTMVIAHAQCGYWDEALRFYSEFRQLGI 188

Query: 57  GLNEFSFSGVLTVCVKTKE 1
             N FSF+GVLTVCVK KE
Sbjct: 189 QCNGFSFAGVLTVCVKLKE 207



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 31/74 (41%), Positives = 48/74 (64%)
 Frame = -3

Query: 237 WNNMLSGYAKLRMMKPARSLFDQMQEKDVVSWNTMVIGYAQNGNCDEALKLYKELRMLNI 58
           W  M+SGYAK   MK A  LF +M EK+ VSW  ++ GYA+NG   +AL+L+ ++ + ++
Sbjct: 261 WTTMVSGYAKWGDMKSANELFVEMPEKNPVSWTALISGYARNGMGHKALELFTKMMLFHV 320

Query: 57  GLNEFSFSGVLTVC 16
             ++F+FS  L  C
Sbjct: 321 RPDQFTFSSCLCAC 334


>ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
           [Vitis vinifera]
          Length = 612

 Score =  118 bits (295), Expect = 6e-25
 Identities = 58/79 (73%), Positives = 63/79 (79%)
 Frame = -3

Query: 237 WNNMLSGYAKLRMMKPARSLFDQMQEKDVVSWNTMVIGYAQNGNCDEALKLYKELRMLNI 58
           WNNMLSGYAKL M+KPAR LFD+M EKDVVSWNTMVI +AQ G  DEAL+ Y E R L I
Sbjct: 129 WNNMLSGYAKLGMIKPARKLFDKMPEKDVVSWNTMVIAHAQCGYWDEALRFYSEFRQLGI 188

Query: 57  GLNEFSFSGVLTVCVKTKE 1
             N FSF+GVLTVCVK KE
Sbjct: 189 QCNGFSFAGVLTVCVKLKE 207



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 31/74 (41%), Positives = 48/74 (64%)
 Frame = -3

Query: 237 WNNMLSGYAKLRMMKPARSLFDQMQEKDVVSWNTMVIGYAQNGNCDEALKLYKELRMLNI 58
           W  M+SGYAK   MK A  LF +M EK+ VSW  ++ GYA+NG   +AL+L+ ++ + ++
Sbjct: 261 WTTMVSGYAKWGDMKSANELFVEMPEKNPVSWTALISGYARNGMGHKALELFTKMMLFHV 320

Query: 57  GLNEFSFSGVLTVC 16
             ++F+FS  L  C
Sbjct: 321 RPDQFTFSSCLCAC 334


>ref|NP_179705.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75206523|sp|Q9SKQ4.1|PP167_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g21090 gi|4803934|gb|AAD29807.1| unknown protein
           [Arabidopsis thaliana] gi|330252028|gb|AEC07122.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 597

 Score =  106 bits (265), Expect = 2e-21
 Identities = 50/79 (63%), Positives = 60/79 (75%)
 Frame = -3

Query: 237 WNNMLSGYAKLRMMKPARSLFDQMQEKDVVSWNTMVIGYAQNGNCDEALKLYKELRMLNI 58
           WNNM+SGY K  M+  AR +FD M E+DVVSWNTMVIGYAQ+GN  EAL  YKE R   I
Sbjct: 116 WNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGI 175

Query: 57  GLNEFSFSGVLTVCVKTKE 1
             NEFSF+G+LT CVK+++
Sbjct: 176 KFNEFSFAGLLTACVKSRQ 194



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 28/71 (39%), Positives = 45/71 (63%)
 Frame = -3

Query: 237 WNNMLSGYAKLRMMKPARSLFDQMQEKDVVSWNTMVIGYAQNGNCDEALKLYKELRMLNI 58
           W  ++SGYAKL  M+ A  LF +M EK+ VSW  ++ GY + G+ + AL L++++  L +
Sbjct: 248 WTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGV 307

Query: 57  GLNEFSFSGVL 25
              +F+FS  L
Sbjct: 308 KPEQFTFSSCL 318


>ref|XP_002880355.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297326194|gb|EFH56614.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 599

 Score =  105 bits (261), Expect = 5e-21
 Identities = 49/79 (62%), Positives = 61/79 (77%)
 Frame = -3

Query: 237 WNNMLSGYAKLRMMKPARSLFDQMQEKDVVSWNTMVIGYAQNGNCDEALKLYKELRMLNI 58
           WNNM+SG+ K  M+  AR +FD M E+DVVSWNTMVIGYAQ+GN  EAL  +KELR   I
Sbjct: 116 WNNMVSGFVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFFKELRRSGI 175

Query: 57  GLNEFSFSGVLTVCVKTKE 1
             NEFSF+G+LT CVK+++
Sbjct: 176 KFNEFSFAGLLTACVKSRQ 194



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 28/71 (39%), Positives = 45/71 (63%)
 Frame = -3

Query: 237 WNNMLSGYAKLRMMKPARSLFDQMQEKDVVSWNTMVIGYAQNGNCDEALKLYKELRMLNI 58
           W  ++SGYAKL  M+ A  LF +M EK+ VSW  ++ GY + G+ D AL L++++  + +
Sbjct: 248 WTTLISGYAKLGDMEAADKLFREMPEKNPVSWTALIAGYVRQGSGDLALDLFRKMIAMRV 307

Query: 57  GLNEFSFSGVL 25
              +F+FS  L
Sbjct: 308 KPEQFTFSSCL 318


Top