BLASTX nr result

ID: Atractylodes22_contig00047212 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00047212
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD32616.1| reverse transcriptase - beet retrotransposon, put...    74   1e-11
ref|XP_003589852.1| hypothetical protein MTR_1g040450 [Medicago ...    69   3e-10
ref|XP_003530391.1| PREDICTED: uncharacterized protein LOC100804...    68   7e-10
ref|XP_003606185.1| hypothetical protein MTR_4g054200 [Medicago ...    67   1e-09
gb|ABN08564.1| RNA-directed DNA polymerase (Reverse transcriptas...    65   8e-09

>gb|ABD32616.1| reverse transcriptase - beet retrotransposon, putative [Medicago
           truncatula]
          Length = 258

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 40/97 (41%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
 Frame = -1

Query: 345 AKKRELWQALMDIIQSPSPIAWVLFGDFNEVRSSKERRNTSYNQNSAQF--FNDFIEETH 172
           A ++ LW +L   +Q        + GDFN+V  S+ERR+ +   +S  F  FN FI +  
Sbjct: 90  AAQKLLWDSLSLRLQQLRGRKVCVCGDFNDVWCSEERRSVNVRHSSLDFSHFNSFIGDNS 149

Query: 171 LHDLPLGGKRYTRVGEIGSKFSKLDRFLVSEKFCSIW 61
           LHDLPLGG+++T     G   S+LDRFL+SE +C  W
Sbjct: 150 LHDLPLGGRKFTWFKGDGRSMSRLDRFLLSEDWCLAW 186


>ref|XP_003589852.1| hypothetical protein MTR_1g040450 [Medicago truncatula]
           gi|355478900|gb|AES60103.1| hypothetical protein
           MTR_1g040450 [Medicago truncatula]
          Length = 446

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 40/98 (40%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
 Frame = -1

Query: 339 KRELWQALMDIIQSPSPIAWVLFGDFNEVRSSKER--RNTSYNQNSAQFFNDFIEETHLH 166
           K+ELW+ L  +  +   +   + GDFN V+S  ER  R T + Q  A+ FN FI++  L 
Sbjct: 187 KKELWERLHLLAINYIDLCLCVCGDFNSVQSIDERKGRGTVFRQGDAELFNKFIQDNFLI 246

Query: 165 DLPLGGKRYT-RVGEIGSKFSKLDRFLVSEKFCSIWQS 55
           DLP+ G+ +T   G++ S  S+LDRFL+S K+C  W S
Sbjct: 247 DLPICGRLFTWYYGDVVS-MSRLDRFLLSNKWCEKWPS 283


>ref|XP_003530391.1| PREDICTED: uncharacterized protein LOC100804594 [Glycine max]
          Length = 4413

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 39/98 (39%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
 Frame = -1

Query: 345  AKKRELWQALMDIIQSPSPIAWVLFGDFNEVRSSKERRNTSYNQ---NSAQFFNDFIEET 175
            A KR LW  L  +  +     W   GDFN VRS +ER + S        +  FND+I E 
Sbjct: 759  AGKRTLWNELRHLKAANPTGLWCFLGDFNSVRSQEERISLSQRSVVSADSSEFNDWISEL 818

Query: 174  HLHDLPLGGKRYTRVGEIGSKFSKLDRFLVSEKFCSIW 61
             LHD+   G  +T     GS  S+LDRFLVS+++ S+W
Sbjct: 819  DLHDIRCLGSNFTWFRPNGSAKSRLDRFLVSDQWLSLW 856



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 39/98 (39%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
 Frame = -1

Query: 345  AKKRELWQALMDIIQSPSPIAWVLFGDFNEVRSSKERRNTSYNQNSAQF---FNDFIEET 175
            A KR LW  L  +  S     W   GDFN  RS +ER + S       +   FND+I E 
Sbjct: 2376 AGKRILWDDLRQLKASNPTGLWCFLGDFNTTRSQEERISLSQRSVVTSYTADFNDWISEM 2435

Query: 174  HLHDLPLGGKRYTRVGEIGSKFSKLDRFLVSEKFCSIW 61
             LHD+   G  +T     GS  S+LDRFLVS+++ S+W
Sbjct: 2436 ELHDIRCLGSNFTWFRPNGSAKSRLDRFLVSDQWLSLW 2473


>ref|XP_003606185.1| hypothetical protein MTR_4g054200 [Medicago truncatula]
           gi|355507240|gb|AES88382.1| hypothetical protein
           MTR_4g054200 [Medicago truncatula]
          Length = 252

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
 Frame = -1

Query: 270 GDFNEVRSSKERRNTSYNQNSAQF--FNDFIEETHLHDLPLGGKRYTRVGEIGSKFSKLD 97
           GDFN VRS +E+R+ S    ++ F  FN FI+   L DLPLGG+ +T     G   S++D
Sbjct: 170 GDFNAVRSREEKRSASVGSINSDFTHFNAFIDSNFLCDLPLGGRLFTWFKGDGKSMSRID 229

Query: 96  RFLVSEKFCSIW 61
           RFL+SE++C +W
Sbjct: 230 RFLLSEEWCLLW 241


>gb|ABN08564.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 977

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
 Frame = -1

Query: 339 KRELWQALMDIIQSPSPIAWVLFGDFNEVRSSKERR-----NTSYNQNSAQFFNDFIEET 175
           KR LW  L ++ +      W L GDFN VRS +ERR     +   ++    FFN+F EE 
Sbjct: 91  KRRLWGILAEVKEGLGDGVWCLVGDFNAVRSREERRVVREMDPYSHRRERLFFNNFFEEI 150

Query: 174 HLHDLPLGGKRYTRVGEIGSKFSKLDRFLVSEKFCSIW 61
            L D+   G+++T     G   S++DR LVS+ + S W
Sbjct: 151 DLEDINPLGRKFTWYNSNGVAMSRIDRVLVSKNWESTW 188


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