BLASTX nr result

ID: Atractylodes22_contig00047204 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00047204
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511804.1| pentatricopeptide repeat-containing protein,...   149   2e-34
ref|XP_003623821.1| Pentatricopeptide repeat-containing protein ...   149   3e-34
ref|XP_002302564.1| predicted protein [Populus trichocarpa] gi|2...   147   9e-34
ref|XP_003520055.1| PREDICTED: pentatricopeptide repeat-containi...   145   3e-33
ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containi...   142   3e-32

>ref|XP_002511804.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548984|gb|EEF50473.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 607

 Score =  149 bits (376), Expect = 2e-34
 Identities = 66/118 (55%), Positives = 95/118 (80%)
 Frame = +1

Query: 85  SVYHSNQKLNESWKSGRVNEAQYLFDEMPEKDEYTWNTMIAGYANSGKVIEAHKLFDDAP 264
           S   SNQ+LN+  KSGR++EA+++FD++PE+DE++WNTMIA YANSG++ +A +LF +AP
Sbjct: 21  SAIKSNQQLNDLSKSGRIDEARHIFDKLPERDEFSWNTMIAAYANSGRLTDAKQLFCEAP 80

Query: 265 NKSSITWSSLISGYCKLGFEFESMTLFCKMQYEGYKPSQFTLGSVLRMCSTNILLSRG 438
            KSSITWSSLISG+CK  F+ E+  L+ +MQ+EG +P+ +TLGS+LR+CS    L +G
Sbjct: 81  LKSSITWSSLISGFCKYEFDIEAFELYLQMQFEGQRPNHYTLGSILRLCSRTGFLQKG 138



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/74 (35%), Positives = 42/74 (56%)
 Frame = +1

Query: 193 NTMIAGYANSGKVIEAHKLFDDAPNKSSITWSSLISGYCKLGFEFESMTLFCKMQYEGYK 372
           N ++  YA  G +  A  +F+  P+K  ++W+SL++GY   G   +++ LFC M+  G  
Sbjct: 361 NALVDMYAKQGNLDYAFTVFNQMPDKDVVSWTSLVTGYSYNGSYEDAIKLFCDMRIAGVC 420

Query: 373 PSQFTLGSVLRMCS 414
           P Q  L SVL  C+
Sbjct: 421 PDQIVLASVLSACA 434


>ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355498836|gb|AES80039.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 837

 Score =  149 bits (375), Expect = 3e-34
 Identities = 70/118 (59%), Positives = 92/118 (77%)
 Frame = +1

Query: 85  SVYHSNQKLNESWKSGRVNEAQYLFDEMPEKDEYTWNTMIAGYANSGKVIEAHKLFDDAP 264
           S+Y +NQ LN+  KSG+VN+A+ LFD+MP+KDEY+WNTMI+ Y N G+++EA +LFD   
Sbjct: 64  SIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCS 123

Query: 265 NKSSITWSSLISGYCKLGFEFESMTLFCKMQYEGYKPSQFTLGSVLRMCSTNILLSRG 438
            KSSITWSS+ISGYCK G + E+  LF  M+ EG+K SQFTLGSVLR+CS+  L+  G
Sbjct: 124 CKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTG 181



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/82 (34%), Positives = 46/82 (56%)
 Frame = +1

Query: 193 NTMIAGYANSGKVIEAHKLFDDAPNKSSITWSSLISGYCKLGFEFESMTLFCKMQYEGYK 372
           N ++  YA +G +  A+ +F+    K  I+W+SL++GY +     ES+ +FC M+  G  
Sbjct: 403 NALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVN 462

Query: 373 PSQFTLGSVLRMCSTNILLSRG 438
           P QF + S+L  C+   LL  G
Sbjct: 463 PDQFIVASILSACAELTLLEFG 484


>ref|XP_002302564.1| predicted protein [Populus trichocarpa] gi|222844290|gb|EEE81837.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score =  147 bits (371), Expect = 9e-34
 Identities = 68/114 (59%), Positives = 92/114 (80%)
 Frame = +1

Query: 97  SNQKLNESWKSGRVNEAQYLFDEMPEKDEYTWNTMIAGYANSGKVIEAHKLFDDAPNKSS 276
           SN+ L +  K GR+++A+ LFD+M ++DE++WNTM+AGYANSG++ EA KLF + P KSS
Sbjct: 30  SNRVLKDLSKRGRIDDARNLFDKMLDRDEFSWNTMVAGYANSGRLTEAKKLFYETPMKSS 89

Query: 277 ITWSSLISGYCKLGFEFESMTLFCKMQYEGYKPSQFTLGSVLRMCSTNILLSRG 438
           ITW+SL+SGYC+ GFE E+  LF +MQ EG +PSQ+TLGSVL +CSTN LL +G
Sbjct: 90  ITWTSLLSGYCRYGFENEAFELFLEMQLEGQRPSQYTLGSVLGLCSTNGLLQKG 143


>ref|XP_003520055.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 852

 Score =  145 bits (367), Expect = 3e-33
 Identities = 69/130 (53%), Positives = 98/130 (75%)
 Frame = +1

Query: 49  HKVASSVIPVTASVYHSNQKLNESWKSGRVNEAQYLFDEMPEKDEYTWNTMIAGYANSGK 228
           H +A S      S++HSNQ LN   KSG++++A+ LFD+M ++DEYTWNTM++GYAN G+
Sbjct: 106 HNIADSY----QSIFHSNQLLNGLSKSGQIDDARELFDKMLQRDEYTWNTMVSGYANVGR 161

Query: 229 VIEAHKLFDDAPNKSSITWSSLISGYCKLGFEFESMTLFCKMQYEGYKPSQFTLGSVLRM 408
           ++EA +LF+   ++SSITWSSLISGYC+ G + E+  LF +M+ EG KPSQ+TLGS+LR 
Sbjct: 162 LVEARELFNGFSSRSSITWSSLISGYCRFGRQAEAFDLFKRMRLEGQKPSQYTLGSILRG 221

Query: 409 CSTNILLSRG 438
           CS   L+ +G
Sbjct: 222 CSALGLIQKG 231



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/82 (34%), Positives = 45/82 (54%)
 Frame = +1

Query: 193 NTMIAGYANSGKVIEAHKLFDDAPNKSSITWSSLISGYCKLGFEFESMTLFCKMQYEGYK 372
           N ++  YA +  +  A+ +F+    K  I+W+SL++GY + G   ES+  FC M+  G  
Sbjct: 453 NALVDMYAKTEDLNCAYAVFEKMFEKDVISWTSLVTGYTQNGSHEESLKTFCDMRISGVS 512

Query: 373 PSQFTLGSVLRMCSTNILLSRG 438
           P QF + S+L  C+   LL  G
Sbjct: 513 PDQFIVASILSACAELTLLEFG 534


>ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 840

 Score =  142 bits (358), Expect = 3e-32
 Identities = 69/114 (60%), Positives = 87/114 (76%)
 Frame = +1

Query: 97  SNQKLNESWKSGRVNEAQYLFDEMPEKDEYTWNTMIAGYANSGKVIEAHKLFDDAPNKSS 276
           SNQ L+E  K+GRV+EA+ LFD+MP +D+YTWN MI+ YAN G ++EA KLF++ P K+S
Sbjct: 40  SNQLLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIKNS 99

Query: 277 ITWSSLISGYCKLGFEFESMTLFCKMQYEGYKPSQFTLGSVLRMCSTNILLSRG 438
           ITWSSL+SGYCK G E E +  F +M  +G KPSQ+TLGSVLR CST  LL  G
Sbjct: 100 ITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTG 153


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