BLASTX nr result

ID: Atractylodes22_contig00047201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00047201
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ65869.1| putative integrase [Cucumis melo]                     157   1e-36
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...   157   1e-36
emb|CAJ65876.1| putative integrase [Cucumis melo]                     156   1e-36
emb|CAJ65870.1| putative integrase [Cucumis melo]                     156   2e-36
emb|CAJ65868.1| putative integrase [Cucumis melo]                     156   2e-36

>emb|CAJ65869.1| putative integrase [Cucumis melo]
          Length = 134

 Score =  157 bits (396), Expect = 1e-36
 Identities = 69/99 (69%), Positives = 91/99 (91%)
 Frame = +3

Query: 3   GLLQPLAIPQQVWEDVSMDFVEGLPLSEGYNALLVVVDRLTKYSHFIGIRHPFTAQIIAR 182
           GLLQPL IP ++WED+SMDFVEGLP S+G++ +LVVVDRL+KY+HFI + HPF+A+++A 
Sbjct: 28  GLLQPLPIPNRIWEDISMDFVEGLPCSKGFDTILVVVDRLSKYAHFITLGHPFSAKVVAL 87

Query: 183 VFVKEVVRLHGMPKSVVSDRDKVFISNFWKELWRLQGTK 299
           VFVKEVVRLHG P+S+VSDRD+VF+S+FW+EL+RLQGT+
Sbjct: 88  VFVKEVVRLHGYPRSIVSDRDRVFLSHFWQELFRLQGTQ 126


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score =  157 bits (396), Expect = 1e-36
 Identities = 69/99 (69%), Positives = 90/99 (90%)
 Frame = +3

Query: 3    GLLQPLAIPQQVWEDVSMDFVEGLPLSEGYNALLVVVDRLTKYSHFIGIRHPFTAQIIAR 182
            GLLQPL +P ++WED+SMDF+ GLP S+GY A+LVVVDRL+KYSHFI ++HP+TA++IA 
Sbjct: 922  GLLQPLPVPDRIWEDLSMDFIMGLPKSKGYEAVLVVVDRLSKYSHFILLKHPYTAKVIAD 981

Query: 183  VFVKEVVRLHGMPKSVVSDRDKVFISNFWKELWRLQGTK 299
            VF++EVVRLHG+P S+VSDRD +F+SNFWKEL++LQGTK
Sbjct: 982  VFIREVVRLHGIPLSIVSDRDPIFMSNFWKELFKLQGTK 1020


>emb|CAJ65876.1| putative integrase [Cucumis melo]
          Length = 134

 Score =  156 bits (395), Expect = 1e-36
 Identities = 69/99 (69%), Positives = 91/99 (91%)
 Frame = +3

Query: 3   GLLQPLAIPQQVWEDVSMDFVEGLPLSEGYNALLVVVDRLTKYSHFIGIRHPFTAQIIAR 182
           GLLQPL IP ++WED+SMDFVEGLP S+G++ +LVVVDRL+KY+HFI + HPF+A+++A 
Sbjct: 28  GLLQPLPIPNRIWEDISMDFVEGLPRSKGFDTILVVVDRLSKYAHFITLGHPFSAKVVAL 87

Query: 183 VFVKEVVRLHGMPKSVVSDRDKVFISNFWKELWRLQGTK 299
           VFVKEVVRLHG P+S+VSDRD+VF+S+FW+EL+RLQGT+
Sbjct: 88  VFVKEVVRLHGYPRSIVSDRDRVFLSHFWQELFRLQGTQ 126


>emb|CAJ65870.1| putative integrase [Cucumis melo]
          Length = 134

 Score =  156 bits (394), Expect = 2e-36
 Identities = 68/99 (68%), Positives = 91/99 (91%)
 Frame = +3

Query: 3   GLLQPLAIPQQVWEDVSMDFVEGLPLSEGYNALLVVVDRLTKYSHFIGIRHPFTAQIIAR 182
           GLLQPL IP ++WED+SMDFVEGLP S+G++ +LVVVDRL+KY+HFI + HPF+A+++A 
Sbjct: 28  GLLQPLPIPNRIWEDISMDFVEGLPRSKGFDTILVVVDRLSKYAHFITLGHPFSAKVVAL 87

Query: 183 VFVKEVVRLHGMPKSVVSDRDKVFISNFWKELWRLQGTK 299
           VF+KEVVRLHG P+S+VSDRD+VF+S+FW+EL+RLQGT+
Sbjct: 88  VFIKEVVRLHGYPRSIVSDRDRVFLSHFWQELFRLQGTQ 126


>emb|CAJ65868.1| putative integrase [Cucumis melo]
          Length = 134

 Score =  156 bits (394), Expect = 2e-36
 Identities = 68/99 (68%), Positives = 92/99 (92%)
 Frame = +3

Query: 3   GLLQPLAIPQQVWEDVSMDFVEGLPLSEGYNALLVVVDRLTKYSHFIGIRHPFTAQIIAR 182
           GLLQPL+IP ++WED+SMDFVEGLP S+G++ +LVVVDRL+KY+HFI + HPF+A+++A 
Sbjct: 28  GLLQPLSIPNRIWEDISMDFVEGLPRSKGFDTILVVVDRLSKYAHFITLGHPFSAKVVAL 87

Query: 183 VFVKEVVRLHGMPKSVVSDRDKVFISNFWKELWRLQGTK 299
           VFVKEVVRLHG P+S+VSDRD+VF+++FW+EL+RLQGT+
Sbjct: 88  VFVKEVVRLHGYPRSIVSDRDRVFLNHFWQELFRLQGTQ 126


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