BLASTX nr result

ID: Atractylodes22_contig00047176 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00047176
         (653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266755.1| PREDICTED: RING-H2 finger protein ATL54 [Vit...   148   8e-34
emb|CBI34030.3| unnamed protein product [Vitis vinifera]              145   8e-33
ref|XP_002522602.1| ring finger protein, putative [Ricinus commu...   144   2e-32
ref|XP_002513984.1| ring finger protein, putative [Ricinus commu...   136   3e-30
ref|XP_002301077.1| predicted protein [Populus trichocarpa] gi|2...   134   1e-29

>ref|XP_002266755.1| PREDICTED: RING-H2 finger protein ATL54 [Vitis vinifera]
          Length = 379

 Score =  148 bits (374), Expect = 8e-34
 Identities = 76/146 (52%), Positives = 98/146 (67%), Gaps = 3/146 (2%)
 Frame = +3

Query: 3   NAITIVKYSKGEGVVEGSDCSVCLSEFEADESLRLLPNCKHAFHISCIDTWLRSHTNCPI 182
           +AITI KY +G+G+VEG++CSVCL+EFE DE++RLLP C HAFHI CIDTWL SHTNCP+
Sbjct: 138 SAITICKYKRGDGLVEGTECSVCLAEFEEDEAVRLLPKCNHAFHIPCIDTWLSSHTNCPM 197

Query: 183 CRAGIVNNTVDAPSPEQNTDDMGFMGETNLGISNWGDDNRGEASENSELRIGETDEED-- 356
           CRAGIV++T  APSPEQ+ ++ G + E  + I   G        E  ELRIG  +E +  
Sbjct: 198 CRAGIVSSTAGAPSPEQSVENSGPLEEARVEIPENGGQFEEIEDEVCELRIGREEEGELG 257

Query: 357 -VSNTAKAEVVNSEGNRELLIIRRSV 431
            V N   +  V  E   E+  +RRSV
Sbjct: 258 GVENERSSCEVAKEEVDEIQPMRRSV 283


>emb|CBI34030.3| unnamed protein product [Vitis vinifera]
          Length = 284

 Score =  145 bits (365), Expect = 8e-33
 Identities = 67/119 (56%), Positives = 87/119 (73%)
 Frame = +3

Query: 3   NAITIVKYSKGEGVVEGSDCSVCLSEFEADESLRLLPNCKHAFHISCIDTWLRSHTNCPI 182
           +AITI KY +G+G+VEG++CSVCL+EFE DE++RLLP C HAFHI CIDTWL SHTNCP+
Sbjct: 64  SAITICKYKRGDGLVEGTECSVCLAEFEEDEAVRLLPKCNHAFHIPCIDTWLSSHTNCPM 123

Query: 183 CRAGIVNNTVDAPSPEQNTDDMGFMGETNLGISNWGDDNRGEASENSELRIGETDEEDV 359
           CRAGIV++T  APSPEQ+ ++ G + E  + I   G        E  ELRIG  +E ++
Sbjct: 124 CRAGIVSSTAGAPSPEQSVENSGPLEEARVEIPENGGQFEEIEDEVCELRIGREEEGEL 182


>ref|XP_002522602.1| ring finger protein, putative [Ricinus communis]
           gi|223538078|gb|EEF39689.1| ring finger protein,
           putative [Ricinus communis]
          Length = 378

 Score =  144 bits (362), Expect = 2e-32
 Identities = 74/147 (50%), Positives = 99/147 (67%), Gaps = 4/147 (2%)
 Frame = +3

Query: 3   NAITIVKYSKGEGVVEGSDCSVCLSEFEADESLRLLPNCKHAFHISCIDTWLRSHTNCPI 182
           N+I++ KY +G+G+VEG+DCSVCL+EFE DE+LRLLP C HAFHI CIDTWLRSHTNCP+
Sbjct: 137 NSISVCKYKRGDGLVEGTDCSVCLNEFEEDETLRLLPKCSHAFHIPCIDTWLRSHTNCPL 196

Query: 183 CRAGIVNNTVDAPSPEQNTDDMGFMGETNLGIS-NWGDDNRGEASENSELRIG---ETDE 350
           CRA IV N+  A S E  ++ +    ET +G+S N  +  R     + ELR+G   E + 
Sbjct: 197 CRAPIVANSARATSSEGTSESLSSGEETRIGVSENDQESERELEGGDGELRVGIEEEREV 256

Query: 351 EDVSNTAKAEVVNSEGNRELLIIRRSV 431
           ED +   ++E +N E    +  IRRSV
Sbjct: 257 EDENTRKRSEFLNGE-EEGIQPIRRSV 282


>ref|XP_002513984.1| ring finger protein, putative [Ricinus communis]
           gi|223547070|gb|EEF48567.1| ring finger protein,
           putative [Ricinus communis]
          Length = 393

 Score =  136 bits (343), Expect = 3e-30
 Identities = 82/188 (43%), Positives = 112/188 (59%), Gaps = 16/188 (8%)
 Frame = +3

Query: 3   NAITIVKYSKGEGVVEGSDCSVCLSEFEADESLRLLPNCKHAFHISCIDTWLRSHTNCPI 182
           N+IT+ KY KGEG++EG++CSVCLSEF+ DE+LRLLP C HAFHISCIDTWLRSHTNCP+
Sbjct: 132 NSITVCKYKKGEGLIEGTECSVCLSEFQQDETLRLLPKCNHAFHISCIDTWLRSHTNCPL 191

Query: 183 CRAGIVNNTVDAP--SPEQNTDDMGFMGETNLG-------ISNWGD--DNRGEASENSE- 326
           CRA IV++ V  P  S  QN D++  +  T +        +SN  +  +NR  A E  E 
Sbjct: 192 CRAHIVHDPVPTPLISINQNPDNLNTIISTQMDNSEIDGELSNTQERNENRAAADEGGET 251

Query: 327 LRIG--ETDEEDV--SNTAKAEVVNSEGNRELLIIRRSVPDHHGIPFESVDEGLGMESVK 494
           + +G   T +EDV  +N+   E+    GN   +      P    +  +S+       S+K
Sbjct: 252 VHVGSERTLKEDVNSANSDNFEIFCDSGNDHQVAKSDIQPMRRSVSMDSLTAVTTNSSLK 311

Query: 495 IDQTTGID 518
            D T+ ID
Sbjct: 312 -DTTSPID 318


>ref|XP_002301077.1| predicted protein [Populus trichocarpa] gi|222842803|gb|EEE80350.1|
           predicted protein [Populus trichocarpa]
          Length = 389

 Score =  134 bits (337), Expect = 1e-29
 Identities = 75/155 (48%), Positives = 96/155 (61%), Gaps = 9/155 (5%)
 Frame = +3

Query: 3   NAITIVKYSKGEGVVEGSDCSVCLSEFEADESLRLLPNCKHAFHISCIDTWLRSHTNCPI 182
           N+IT+ KY KGEG++EG++CSVCLSEF+ DE+LRLLP C HAFHISCIDTWLRSHTNCP+
Sbjct: 132 NSITVCKYKKGEGLIEGTECSVCLSEFQQDETLRLLPKCNHAFHISCIDTWLRSHTNCPL 191

Query: 183 CRAGIVNNTVDAP--SPEQNTDDMGFMGETNLGIS--NWGDDNRGEASENSELR-----I 335
           CR  I+N     P  S  QN D++     T +  S  + G  N  E++E  E R     +
Sbjct: 192 CRTHIINGPASTPLISVGQNHDNLNPTFSTQMENSDVDSGLGNNQESNEPCENRAGTEEV 251

Query: 336 GETDEEDVSNTAKAEVVNSEGNRELLIIRRSVPDH 440
           GE  +     T K E VNS    +L ++  SV  H
Sbjct: 252 GEILQVGEERTLKDE-VNSNDIGDLQVLCSSVDKH 285


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