BLASTX nr result

ID: Atractylodes22_contig00047170 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00047170
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542115.1| PREDICTED: probable polygalacturonase At3g15...   117   7e-25
gb|ABD28723.1| Glycoside hydrolase, family 28 [Medicago truncatula]   117   1e-24
ref|XP_003597886.1| Polygalacturonase [Medicago truncatula] gi|3...   117   1e-24
ref|XP_003546050.1| PREDICTED: probable polygalacturonase At3g15...   117   1e-24
ref|XP_002266543.2| PREDICTED: probable polygalacturonase At3g15...   103   1e-20

>ref|XP_003542115.1| PREDICTED: probable polygalacturonase At3g15720-like [Glycine max]
          Length = 422

 Score =  117 bits (294), Expect = 7e-25
 Identities = 53/93 (56%), Positives = 68/93 (73%)
 Frame = -3

Query: 321 NPIMIDQYYCPTQKNCLNFTSAVKISDISFIGIVGTSRMDNVINLSCSRSVACTKIVMDR 142
           NPI+IDQ+YCP + +C N T A+KISD+++ GIVGTS  D  INLSC ++V C+ IV+D 
Sbjct: 328 NPIIIDQFYCPHRSDCQNQTRAIKISDVTYKGIVGTSLTDKAINLSCDQNVGCSNIVLDH 387

Query: 141 VYIKSATRGRKVFGTCINAHGRASHVKPSFNCL 43
           VYI  +  G+KVF  C NAHG A+H KPS  CL
Sbjct: 388 VYITPSVPGQKVFSYCHNAHGIATHTKPSVKCL 420


>gb|ABD28723.1| Glycoside hydrolase, family 28 [Medicago truncatula]
          Length = 392

 Score =  117 bits (293), Expect = 1e-24
 Identities = 52/94 (55%), Positives = 66/94 (70%)
 Frame = -3

Query: 324 YNPIMIDQYYCPTQKNCLNFTSAVKISDISFIGIVGTSRMDNVINLSCSRSVACTKIVMD 145
           +NPI IDQ+YC  Q  C N T A+K+SD+++ GI GTS  D  INL+C ++V C+ +V D
Sbjct: 297 HNPIWIDQFYCVNQMVCRNMTKAIKVSDVTYRGISGTSLTDKAINLNCDQNVGCSNLVFD 356

Query: 144 RVYIKSATRGRKVFGTCINAHGRASHVKPSFNCL 43
           RVY++SA    KVF  C NAHGRASH KP  NCL
Sbjct: 357 RVYVRSAVPKMKVFSFCHNAHGRASHTKPILNCL 390


>ref|XP_003597886.1| Polygalacturonase [Medicago truncatula] gi|355486934|gb|AES68137.1|
           Polygalacturonase [Medicago truncatula]
          Length = 404

 Score =  117 bits (293), Expect = 1e-24
 Identities = 52/94 (55%), Positives = 66/94 (70%)
 Frame = -3

Query: 324 YNPIMIDQYYCPTQKNCLNFTSAVKISDISFIGIVGTSRMDNVINLSCSRSVACTKIVMD 145
           +NPI IDQ+YC  Q  C N T A+K+SD+++ GI GTS  D  INL+C ++V C+ +V D
Sbjct: 309 HNPIWIDQFYCVNQMVCRNMTKAIKVSDVTYRGISGTSLTDKAINLNCDQNVGCSNLVFD 368

Query: 144 RVYIKSATRGRKVFGTCINAHGRASHVKPSFNCL 43
           RVY++SA    KVF  C NAHGRASH KP  NCL
Sbjct: 369 RVYVRSAVPKMKVFSFCHNAHGRASHTKPILNCL 402


>ref|XP_003546050.1| PREDICTED: probable polygalacturonase At3g15720-like [Glycine max]
          Length = 401

 Score =  117 bits (292), Expect = 1e-24
 Identities = 53/93 (56%), Positives = 68/93 (73%)
 Frame = -3

Query: 321 NPIMIDQYYCPTQKNCLNFTSAVKISDISFIGIVGTSRMDNVINLSCSRSVACTKIVMDR 142
           +PI+IDQ+YCP + +C N T A+KISD+++ GIVGTS  D  INLSC ++V C+ IV+D 
Sbjct: 307 SPIIIDQFYCPHRSDCQNQTRAIKISDVTYKGIVGTSLTDKAINLSCDQNVGCSNIVLDH 366

Query: 141 VYIKSATRGRKVFGTCINAHGRASHVKPSFNCL 43
           VYI  A  G+KVF  C NAHG A+H KPS  CL
Sbjct: 367 VYITPAVPGQKVFSYCHNAHGIATHTKPSVKCL 399


>ref|XP_002266543.2| PREDICTED: probable polygalacturonase At3g15720-like [Vitis
           vinifera]
          Length = 366

 Score =  103 bits (257), Expect = 1e-20
 Identities = 51/94 (54%), Positives = 62/94 (65%)
 Frame = -3

Query: 321 NPIMIDQYYCPTQKNCLNFTSAVKISDISFIGIVGTSRMDNVINLSCSRSVACTKIVMDR 142
           NPI+IDQYYCP    C   TSAV+ISD+SF G +GTS  DN I LSCS +V CT I +D 
Sbjct: 273 NPIIIDQYYCP-HSVCQTTTSAVQISDVSFTGFLGTSATDNAIKLSCSETVGCTNISLDY 331

Query: 141 VYIKSATRGRKVFGTCINAHGRASHVKPSFNCLK 40
           + IK A+     + +CINAHG A +  PS  CLK
Sbjct: 332 INIKLASGNGNTYSSCINAHGTAHNTFPSLLCLK 365


Top