BLASTX nr result

ID: Atractylodes22_contig00047149 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00047149
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635790.1| Receptor-like kinase [Medicago truncatula] g...    44   7e-09
gb|ABD28747.2| Putative non-LTR retroelement reverse transcripta...    42   4e-08
emb|CAN64017.1| hypothetical protein VITISV_031525 [Vitis vinifera]    45   5e-06
emb|CAN70431.1| hypothetical protein VITISV_030910 [Vitis vinifera]    39   5e-06
emb|CAN75040.1| hypothetical protein VITISV_026478 [Vitis vinifera]    39   6e-06

>ref|XP_003635790.1| Receptor-like kinase [Medicago truncatula]
            gi|355501725|gb|AES82928.1| Receptor-like kinase
            [Medicago truncatula]
          Length = 2313

 Score = 43.9 bits (102), Expect(2) = 7e-09
 Identities = 20/51 (39%), Positives = 30/51 (58%)
 Frame = -3

Query: 348  SLFCAPARVLSCLEQVRRVFFWGEGGSKHSYSYSWVRWDTVLHPFHMGVAG 196
            S F APA ++S +E + + FFW  GGS+ +   SW++WD +  P   G  G
Sbjct: 1346 SFFKAPAGIISLIESIFKRFFW--GGSEDNNKISWIKWDDICVPKEDGGLG 1394



 Score = 40.8 bits (94), Expect(2) = 7e-09
 Identities = 18/42 (42%), Positives = 25/42 (59%)
 Frame = -1

Query: 206  GLQVGSL*ASNWSLLGKWWWHFFCERDALWVRVIKRAFGCDG 81
            GL V  L   N+SLLGKW W    +++ LW  V+K  +G +G
Sbjct: 1392 GLGVRRLREFNFSLLGKWCWRMLVDKEGLWYCVLKARYGEEG 1433


>gb|ABD28747.2| Putative non-LTR retroelement reverse transcriptase, related
           [Medicago truncatula]
          Length = 193

 Score = 42.0 bits (97), Expect(2) = 4e-08
 Identities = 19/41 (46%), Positives = 25/41 (60%)
 Frame = -3

Query: 348 SLFCAPARVLSCLEQVRRVFFWGEGGSKHSYSYSWVRWDTV 226
           S F AP+ ++S +E +   FFWG G  K     SWVRWDT+
Sbjct: 31  SFFKAPSGIISSIESLFNKFFWGGGEEKR--KISWVRWDTL 69



 Score = 40.4 bits (93), Expect(2) = 4e-08
 Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = -1

Query: 206 GLQVGSL*ASNWSLLGKWWWHFFCERDALWVRVIKRAFG-CDGALRVG 66
           GL V  L   N +L+GKW W    ER+ALW +V+   +G  DG L  G
Sbjct: 77  GLGVTRLREFNIALVGKWCWRLLLEREALWRKVLVARYGVADGGLEDG 124


>emb|CAN64017.1| hypothetical protein VITISV_031525 [Vitis vinifera]
          Length = 1355

 Score = 45.1 bits (105), Expect(2) = 5e-06
 Identities = 26/60 (43%), Positives = 33/60 (55%)
 Frame = -1

Query: 206  GLQVGSL*ASNWSLLGKWWWHFFCERDALWVRVIKRAFGCDGALRVGGLIPSRSLRGHGL 27
            GL + +L   N +LLGKW W F  E+D+LW +VI R FG +      G   SR   G GL
Sbjct: 1130 GLGIRNLSRLNKALLGKWCWRFASEQDSLWKQVIVRKFGEEDGRWCSG--DSRESHGVGL 1187



 Score = 30.0 bits (66), Expect(2) = 5e-06
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -3

Query: 348  SLFCAPARVLSCLEQVRRVFFWGEGGSK 265
            SLF  P +V   LE+++R F WG G S+
Sbjct: 1084 SLFIIPRKVSPRLEKIQRDFLWGGGASQ 1111


>emb|CAN70431.1| hypothetical protein VITISV_030910 [Vitis vinifera]
          Length = 971

 Score = 39.3 bits (90), Expect(2) = 5e-06
 Identities = 18/39 (46%), Positives = 22/39 (56%)
 Frame = -1

Query: 206 GLQVGSL*ASNWSLLGKWWWHFFCERDALWVRVIKRAFG 90
           GL  G +   N +LLGKW W F  ER  LW +VI   +G
Sbjct: 513 GLGFGKISLRNIALLGKWLWRFPRERSGLWYKVIGSIYG 551



 Score = 35.8 bits (81), Expect(2) = 5e-06
 Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
 Frame = -3

Query: 348 SLFCAPARVLSCLEQVRRVFFW---GEGGSKHSYSYSWVRWDTVLHPFHMGVAG 196
           SLF  PA V S +E+++R F W   GEG   H      VRW+ V  P  +G  G
Sbjct: 467 SLFKIPASVASKIEKMQRNFLWSGAGEGKKDH-----LVRWEVVSRPKELGGLG 515


>emb|CAN75040.1| hypothetical protein VITISV_026478 [Vitis vinifera]
          Length = 1776

 Score = 39.3 bits (90), Expect(2) = 6e-06
 Identities = 18/39 (46%), Positives = 22/39 (56%)
 Frame = -1

Query: 206  GLQVGSL*ASNWSLLGKWWWHFFCERDALWVRVIKRAFG 90
            GL  G +   N +LLGKW W F  ER  LW +VI   +G
Sbjct: 1478 GLGFGKISLRNIALLGKWLWRFPRERSGLWYKVIGSIYG 1516



 Score = 35.4 bits (80), Expect(2) = 6e-06
 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
 Frame = -3

Query: 348  SLFCAPARVLSCLEQVRRVFFW---GEGGSKHSYSYSWVRWDTVLHPFHMGVAG 196
            SLF  PA + S +E+++R F W   GEG   H      VRW+ V  P  +G  G
Sbjct: 1432 SLFKIPASIASKIEKMQRNFLWSGAGEGKKDH-----LVRWEVVSRPKELGGLG 1480


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