BLASTX nr result

ID: Atractylodes22_contig00047125 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00047125
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517770.1| PREDICTED: transcription factor IIIB 50 kDa ...    83   3e-14
ref|XP_002275055.1| PREDICTED: uncharacterized protein LOC100260...    79   5e-13
emb|CAN78204.1| hypothetical protein VITISV_019153 [Vitis vinifera]    78   7e-13
ref|XP_003594604.1| hypothetical protein MTR_2g031410 [Medicago ...    77   1e-12
ref|XP_002517218.1| conserved hypothetical protein [Ricinus comm...    76   2e-12

>ref|XP_003517770.1| PREDICTED: transcription factor IIIB 50 kDa subunit-like [Glycine
           max]
          Length = 536

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 37/78 (47%), Positives = 56/78 (71%)
 Frame = -2

Query: 236 LGKSGSRYDYSYRETKIYLAQKIVSDILLKLDLENRVDEVNNMIKIITEEEYGSGDWFNV 57
           +G +GS   YSYRE K++ AQ ++ ++  +L L ++  +V +MI  ITE E+G G+WF+V
Sbjct: 55  VGTAGSGSLYSYRERKLFAAQNLIDEVTNQLGLSSKSGDVRSMISTITEGEFGQGEWFHV 114

Query: 56  LVGACIYVVMRKANKWLP 3
           L+GAC YVVMRK ++ LP
Sbjct: 115 LIGACAYVVMRKEDRPLP 132


>ref|XP_002275055.1| PREDICTED: uncharacterized protein LOC100260157 [Vitis vinifera]
           gi|297745306|emb|CBI40386.3| unnamed protein product
           [Vitis vinifera]
          Length = 535

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 36/79 (45%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
 Frame = -2

Query: 236 LGKSGSRYDYSYRETKIYLAQKIVSDILLKLDLEN-RVDEVNNMIKIITEEEYGSGDWFN 60
           +G +G+    +Y++ KI+ AQK++ D++ KL   + + +EV  M+  ITE E+G GDWF 
Sbjct: 55  VGTAGTGSSLNYKDKKIFEAQKLIDDLMFKLGFSSEKSNEVRTMVSTITEGEFGQGDWFP 114

Query: 59  VLVGACIYVVMRKANKWLP 3
           VLVGAC YVV R++N+ LP
Sbjct: 115 VLVGACSYVVRRRSNRALP 133


>emb|CAN78204.1| hypothetical protein VITISV_019153 [Vitis vinifera]
          Length = 535

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 36/79 (45%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
 Frame = -2

Query: 236 LGKSGSRYDYSYRETKIYLAQKIVSDILLKLDLEN-RVDEVNNMIKIITEEEYGSGDWFN 60
           +G +G+    +Y++ KI+ AQK++ D++ KL   + + +EV  M+  ITE E+G GDWF 
Sbjct: 55  VGTAGTGSSLNYKDKKIFEAQKLIDDLMFKLGFSSEKSNEVRXMVSTITEGEFGQGDWFP 114

Query: 59  VLVGACIYVVMRKANKWLP 3
           VLVGAC YVV R++N+ LP
Sbjct: 115 VLVGACSYVVRRRSNRALP 133


>ref|XP_003594604.1| hypothetical protein MTR_2g031410 [Medicago truncatula]
           gi|355483652|gb|AES64855.1| hypothetical protein
           MTR_2g031410 [Medicago truncatula]
          Length = 532

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 35/77 (45%), Positives = 51/77 (66%)
 Frame = -2

Query: 236 LGKSGSRYDYSYRETKIYLAQKIVSDILLKLDLENRVDEVNNMIKIITEEEYGSGDWFNV 57
           +G SGS   YSY++ K++ A+  +    +KL L ++  E+N MI  IT+ E+G GDWF V
Sbjct: 55  IGTSGSGTIYSYKDRKLFSARNSIEQFTIKLGLSSKKIEINTMISDITDGEFGQGDWFQV 114

Query: 56  LVGACIYVVMRKANKWL 6
           L+GAC YVVMR+  + L
Sbjct: 115 LIGACCYVVMRRDERAL 131


>ref|XP_002517218.1| conserved hypothetical protein [Ricinus communis]
           gi|223543589|gb|EEF45118.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 532

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 37/76 (48%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
 Frame = -2

Query: 236 LGKSGSRYDYSYRETKIYLAQKIVSDILLKLDL-ENRVDEVNNMIKIITEEEYGSGDWFN 60
           +G SG+    +Y+E KI+ A K++ DI  KL+L   +V ++ +MI  IT+ EYG GDWF 
Sbjct: 51  VGTSGTGSTLNYKEKKIFEANKLIDDIAYKLNLLGQKVTDIKSMIDNITDGEYGQGDWFP 110

Query: 59  VLVGACIYVVMRKANK 12
           VL+GAC YVV+R  NK
Sbjct: 111 VLIGACAYVVVRNENK 126


Top