BLASTX nr result

ID: Atractylodes22_contig00047045 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00047045
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30660.3| unnamed protein product [Vitis vinifera]               96   3e-18
ref|XP_002267303.1| PREDICTED: pentatricopeptide repeat-containi...    96   3e-18
emb|CAN75464.1| hypothetical protein VITISV_006518 [Vitis vinifera]    96   3e-18
ref|XP_003541711.1| PREDICTED: pentatricopeptide repeat-containi...    93   3e-17
ref|XP_002522543.1| pentatricopeptide repeat-containing protein,...    89   4e-16

>emb|CBI30660.3| unnamed protein product [Vitis vinifera]
          Length = 598

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 44/69 (63%), Positives = 54/69 (78%)
 Frame = -2

Query: 253 ILHLKSSCLLYARQVFDNLRQPTPTAYNYMIAGYTKHGEVGESLNLVRRVVACNERPDGY 74
           ILHLKS CL YARQ+FD + QPT +AYNYMI+GY KHG++ E LNLV R+    E+PDG+
Sbjct: 85  ILHLKSRCLRYARQLFDEMHQPTLSAYNYMISGYLKHGQIEELLNLVSRLTFSYEKPDGF 144

Query: 73  TFSMILNVS 47
           TFSMIL  +
Sbjct: 145 TFSMILKAT 153


>ref|XP_002267303.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690,
           mitochondrial [Vitis vinifera]
          Length = 533

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 44/69 (63%), Positives = 54/69 (78%)
 Frame = -2

Query: 253 ILHLKSSCLLYARQVFDNLRQPTPTAYNYMIAGYTKHGEVGESLNLVRRVVACNERPDGY 74
           ILHLKS CL YARQ+FD + QPT +AYNYMI+GY KHG++ E LNLV R+    E+PDG+
Sbjct: 85  ILHLKSRCLRYARQLFDEMHQPTLSAYNYMISGYLKHGQIEELLNLVSRLTFSYEKPDGF 144

Query: 73  TFSMILNVS 47
           TFSMIL  +
Sbjct: 145 TFSMILKAT 153


>emb|CAN75464.1| hypothetical protein VITISV_006518 [Vitis vinifera]
          Length = 504

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 44/69 (63%), Positives = 54/69 (78%)
 Frame = -2

Query: 253 ILHLKSSCLLYARQVFDNLRQPTPTAYNYMIAGYTKHGEVGESLNLVRRVVACNERPDGY 74
           ILHLKS CL YARQ+FD + QPT +AYNYMI+GY KHG++ E LNLV R+    E+PDG+
Sbjct: 85  ILHLKSRCLRYARQLFDEMHQPTLSAYNYMISGYLKHGQIEELLNLVSRLTFSYEKPDGF 144

Query: 73  TFSMILNVS 47
           TFSMIL  +
Sbjct: 145 TFSMILKAT 153


>ref|XP_003541711.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690,
           mitochondrial-like [Glycine max]
          Length = 525

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 45/71 (63%), Positives = 55/71 (77%)
 Frame = -2

Query: 253 ILHLKSSCLLYARQVFDNLRQPTPTAYNYMIAGYTKHGEVGESLNLVRRVVACNERPDGY 74
           IL+LK +CL YARQVFD+LR  T +AYNYMI+GY K  +V ESL LV R++   E+PDG+
Sbjct: 79  ILYLKCNCLRYARQVFDDLRDRTLSAYNYMISGYLKQDQVEESLGLVHRLLVSGEKPDGF 138

Query: 73  TFSMILNVSTS 41
           TFSMIL  STS
Sbjct: 139 TFSMILKASTS 149


>ref|XP_002522543.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538234|gb|EEF39843.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 530

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 44/71 (61%), Positives = 54/71 (76%)
 Frame = -2

Query: 253 ILHLKSSCLLYARQVFDNLRQPTPTAYNYMIAGYTKHGEVGESLNLVRRVVACNERPDGY 74
           IL+LK  CL YARQ+FD L Q T +AYNY+I GY K G V +S+NLVRR+V   +RPDG+
Sbjct: 85  ILYLKCGCLKYARQMFDELPQRTLSAYNYLIGGYLKLGLVQDSMNLVRRLVLEGQRPDGF 144

Query: 73  TFSMILNVSTS 41
           T+SMIL  STS
Sbjct: 145 TYSMILKASTS 155


Top