BLASTX nr result

ID: Atractylodes22_contig00046997 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00046997
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   114   6e-24
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   109   2e-22
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                   109   3e-22
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]    88   8e-16
gb|ADN34034.1| gypsy/ty3 element polyprotein [Cucumis melo subsp...    87   1e-15

>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  114 bits (286), Expect = 6e-24
 Identities = 46/73 (63%), Positives = 63/73 (86%)
 Frame = -3

Query: 219 WRFRKLEMPLFDGSNPDGWILRAERYFQFYKLNNDEKLEAAVVGMEGDALLWYQWEHRRR 40
           WR +KL++P+F G+NPDGWI+RAER+FQFY+L  DEK+EAAVV ++G+ALLWYQWE+RRR
Sbjct: 97  WRAKKLDLPVFSGNNPDGWIIRAERFFQFYRLTEDEKVEAAVVSLDGEALLWYQWENRRR 156

Query: 39  PILQWEALKATML 1
           PI +W  ++  +L
Sbjct: 157 PIHRWSEMRWMLL 169


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  109 bits (273), Expect = 2e-22
 Identities = 46/73 (63%), Positives = 59/73 (80%)
 Frame = -3

Query: 219 WRFRKLEMPLFDGSNPDGWILRAERYFQFYKLNNDEKLEAAVVGMEGDALLWYQWEHRRR 40
           WR +KL+MP FD ++PDGWILR ER+F FY L + EK+EAAVV MEGDAL WYQWE++RR
Sbjct: 172 WRHKKLDMPAFDDTDPDGWILRGERFFAFYGLTDAEKMEAAVVAMEGDALRWYQWENKRR 231

Query: 39  PILQWEALKATML 1
           P   WE++K+ +L
Sbjct: 232 PFRNWESMKSFVL 244


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score =  109 bits (272), Expect = 3e-22
 Identities = 44/73 (60%), Positives = 60/73 (82%)
 Frame = -3

Query: 219 WRFRKLEMPLFDGSNPDGWILRAERYFQFYKLNNDEKLEAAVVGMEGDALLWYQWEHRRR 40
           W+ ++L++P+F G+NPDGWILR ERYF FY+L  +E+LEAAVV ++G+ALLW+QWEHR R
Sbjct: 77  WKAKRLDLPIFTGTNPDGWILRTERYFGFYRLAAEEQLEAAVVALDGEALLWFQWEHRHR 136

Query: 39  PILQWEALKATML 1
           PI  W  +KA +L
Sbjct: 137 PITGWPEMKAMLL 149


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 40/74 (54%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
 Frame = -3

Query: 219 WR-FRKLEMPLFDGSNPDGWILRAERYFQFYKLNNDEKLEAAVVGMEGDALLWYQWEHRR 43
           WR  R++EMP+F G NPDGWI RA+RYF  Y L  +EKL AA + ++GDAL WYQW   R
Sbjct: 767 WRGSRRVEMPVFTGENPDGWIFRADRYFATYGLTEEEKLVAAAMSLDGDALSWYQWTDSR 826

Query: 42  RPILQWEALKATML 1
                WE LK  +L
Sbjct: 827 EVFGSWENLKRRLL 840


>gb|ADN34034.1| gypsy/ty3 element polyprotein [Cucumis melo subsp. melo]
          Length = 473

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 36/71 (50%), Positives = 49/71 (69%)
 Frame = -3

Query: 216 RFRKLEMPLFDGSNPDGWILRAERYFQFYKLNNDEKLEAAVVGMEGDALLWYQWEHRRRP 37
           +F+KLEMP+F+G +PDGWI +AE YFQ + LN  EKL+ A+V MEG  L W++W   R+ 
Sbjct: 95  KFKKLEMPVFNGEDPDGWIYKAEYYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRKR 154

Query: 36  ILQWEALKATM 4
              W+ LK  M
Sbjct: 155 FRSWKELKERM 165


Top