BLASTX nr result

ID: Atractylodes22_contig00046903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00046903
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA22288.1| polyprotein [Oryza australiensis]                     171   6e-41
gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subc...   168   4e-40
gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subc...   167   6e-40
gb|ABA97705.1| retrotransposon protein, putative, Ty1-copia subc...   167   8e-40
emb|CAE04999.2| OSJNBb0093G06.7 [Oryza sativa Japonica Group]         166   2e-39

>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  171 bits (433), Expect = 6e-41
 Identities = 79/109 (72%), Positives = 94/109 (86%)
 Frame = +2

Query: 2    EAIVGSESAKWKEAMESEMQSMHDNQVWDLVDLTPGCKTVGCKWVFKKKTDVHGNIHTYK 181
            EA+VG +S KW  AM+SE++SM+DNQVW+LVD   G KT+ CKW+FKKK D+ GN+H YK
Sbjct: 800  EAMVGHDSNKWLGAMKSEIESMYDNQVWNLVDPPDGVKTIECKWLFKKKADMDGNVHIYK 859

Query: 182  ARLVAKGFTQTHGVDYEETFSPVAMIKSIRILLAIAAYYDYEIWQMDVK 328
            ARLVAKGF Q  GVDY+ETFSPVAM+KSIRI+LAIAAY+DYEIWQMDVK
Sbjct: 860  ARLVAKGFKQIQGVDYDETFSPVAMLKSIRIILAIAAYFDYEIWQMDVK 908


>gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 829

 Score =  168 bits (426), Expect = 4e-40
 Identities = 79/109 (72%), Positives = 92/109 (84%)
 Frame = +2

Query: 2   EAIVGSESAKWKEAMESEMQSMHDNQVWDLVDLTPGCKTVGCKWVFKKKTDVHGNIHTYK 181
           EA+VG +S KW  AM+SE++SMH NQVW+LVD   G K + CKWVFKKKTDV GN+H YK
Sbjct: 585 EAMVGPDSEKWLGAMKSEIESMHVNQVWNLVDPPDGVKAIECKWVFKKKTDVDGNVHIYK 644

Query: 182 ARLVAKGFTQTHGVDYEETFSPVAMIKSIRILLAIAAYYDYEIWQMDVK 328
           ARLVAKGF Q  GVDY+ETFSP AM+KSIRI+LAIAAY++YEIWQMDVK
Sbjct: 645 ARLVAKGFRQIQGVDYDETFSPFAMLKSIRIVLAIAAYFNYEIWQMDVK 693


>gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1745

 Score =  167 bits (424), Expect = 6e-40
 Identities = 79/109 (72%), Positives = 92/109 (84%)
 Frame = +2

Query: 2    EAIVGSESAKWKEAMESEMQSMHDNQVWDLVDLTPGCKTVGCKWVFKKKTDVHGNIHTYK 181
            EA+VG +S KW  AM+SE++SMH NQVW+LVD   G K + CKWVFKKKT V GN+H YK
Sbjct: 1286 EAMVGPDSEKWPGAMKSEIESMHVNQVWNLVDPPDGVKAIECKWVFKKKTYVDGNVHIYK 1345

Query: 182  ARLVAKGFTQTHGVDYEETFSPVAMIKSIRILLAIAAYYDYEIWQMDVK 328
            ARLVAKGF Q  GVDY+ETFSPVAM+KSI+I+LAIAAY+DYEIWQMDVK
Sbjct: 1346 ARLVAKGFRQIQGVDYDETFSPVAMLKSIQIVLAIAAYFDYEIWQMDVK 1394


>gb|ABA97705.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 810

 Score =  167 bits (423), Expect = 8e-40
 Identities = 78/109 (71%), Positives = 91/109 (83%)
 Frame = +2

Query: 2   EAIVGSESAKWKEAMESEMQSMHDNQVWDLVDLTPGCKTVGCKWVFKKKTDVHGNIHTYK 181
           EA+VG +S KW  AM+S+++SMH NQVW+LVD   G K + CKWVFKK TDV GN+H YK
Sbjct: 506 EAMVGPDSEKWLGAMKSKIESMHVNQVWNLVDPPDGVKAIKCKWVFKKNTDVDGNVHIYK 565

Query: 182 ARLVAKGFTQTHGVDYEETFSPVAMIKSIRILLAIAAYYDYEIWQMDVK 328
           ARLVAKGF Q  GVDY+ETFSPVAM+KSIRI+L IAAY+DYEIWQMDVK
Sbjct: 566 ARLVAKGFRQIQGVDYDETFSPVAMLKSIRIVLTIAAYFDYEIWQMDVK 614


>emb|CAE04999.2| OSJNBb0093G06.7 [Oryza sativa Japonica Group]
          Length = 923

 Score =  166 bits (420), Expect = 2e-39
 Identities = 76/109 (69%), Positives = 91/109 (83%)
 Frame = +2

Query: 2    EAIVGSESAKWKEAMESEMQSMHDNQVWDLVDLTPGCKTVGCKWVFKKKTDVHGNIHTYK 181
            E +VG +S KW  AM+SE++SMH NQVW+LVD   G K + CKWVFKKK D+ GN+H YK
Sbjct: 683  ETMVGPDSEKWLGAMKSEIESMHVNQVWNLVDPPDGVKAIECKWVFKKKIDIDGNVHMYK 742

Query: 182  ARLVAKGFTQTHGVDYEETFSPVAMIKSIRILLAIAAYYDYEIWQMDVK 328
            A+LVAKGF Q  GVDY+ETFSP+AM+KSIRI+LAIAAY+DYEIWQMDVK
Sbjct: 743  AQLVAKGFRQIQGVDYDETFSPIAMLKSIRIVLAIAAYFDYEIWQMDVK 791


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