BLASTX nr result

ID: Atractylodes22_contig00046852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00046852
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...    89   4e-16
ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...    84   1e-14
ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...    83   3e-14
gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]...    54   1e-05

>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 42/88 (47%), Positives = 58/88 (65%), Gaps = 6/88 (6%)
 Frame = +3

Query: 3    GTVDEFITDFEYITSQVDRLPEEQYLGYFVGGLRSDLRLRVRTFNPRNRLQAMKITRDIE 182
            G+V+EF+  FE ++SQV RLPEEQYLGYF+ GL++ +R RVRT NP  R+Q M+I +D+E
Sbjct: 836  GSVEEFVEAFELLSSQVGRLPEEQYLGYFMSGLKAHIRRRVRTLNPTTRMQMMRIAKDVE 895

Query: 183  AKIN------GAPLSRSIGSGGARIWKG 248
             ++N      G P  +  G      WKG
Sbjct: 896  DELNEEDDDGGRPYGKKHGGDRVERWKG 923


>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 36/63 (57%), Positives = 51/63 (80%)
 Frame = +3

Query: 3   GTVDEFITDFEYITSQVDRLPEEQYLGYFVGGLRSDLRLRVRTFNPRNRLQAMKITRDIE 182
           G+V+EF+  FE ++SQV RLPEEQYLGYF+ GL+  +R RVRT NPRNR++ M+I +D+E
Sbjct: 163 GSVEEFVEAFELLSSQVGRLPEEQYLGYFMSGLKPQIRRRVRTLNPRNRMEMMRIAKDVE 222

Query: 183 AKI 191
            ++
Sbjct: 223 DEL 225


>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 36/63 (57%), Positives = 50/63 (79%)
 Frame = +3

Query: 3   GTVDEFITDFEYITSQVDRLPEEQYLGYFVGGLRSDLRLRVRTFNPRNRLQAMKITRDIE 182
           G+V+EF+  FE ++SQV RLPEEQYLGYF+ GL+  +R RVRT NP NR+Q M+I +D+E
Sbjct: 146 GSVEEFVEAFELLSSQVGRLPEEQYLGYFMSGLKPQIRRRVRTLNPLNRMQMMRIAKDVE 205

Query: 183 AKI 191
            ++
Sbjct: 206 EEL 208


>gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]
           gi|124360393|gb|ABN08406.1| Retrotransposon gag protein
           [Medicago truncatula]
          Length = 224

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 22/43 (51%), Positives = 34/43 (79%)
 Frame = +3

Query: 3   GTVDEFITDFEYITSQVDRLPEEQYLGYFVGGLRSDLRLRVRT 131
           GT++E+I DFE + +Q+ +LP +QYLGYFV GL+  +R +VR+
Sbjct: 173 GTIEEYIADFERLVAQLPKLPNDQYLGYFVHGLKDKIRGKVRS 215


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