BLASTX nr result

ID: Atractylodes22_contig00046839 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00046839
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75780.1| hypothetical protein VITISV_012424 [Vitis vinifera]   157   7e-37
ref|XP_003554843.1| PREDICTED: pentatricopeptide repeat-containi...   156   2e-36
ref|XP_002272860.1| PREDICTED: pentatricopeptide repeat-containi...   155   4e-36
ref|XP_003621136.1| Pentatricopeptide repeat-containing protein ...   149   2e-34
gb|ABN08951.1| Tetratricopeptide-like helical [Medicago truncatula]   149   2e-34

>emb|CAN75780.1| hypothetical protein VITISV_012424 [Vitis vinifera]
          Length = 515

 Score =  157 bits (398), Expect = 7e-37
 Identities = 73/116 (62%), Positives = 91/116 (78%)
 Frame = -3

Query: 446 TVVMLMKIFCKNRKVDEALGFWRYLVERGYCPHSHAVDVLVRSLCSHGRVAEAFECSVQI 267
           T+VMLMK FC+N+++D +L  W YL++RGYCPH HA+D+LV  LCSHG+V EA EC+ Q 
Sbjct: 397 TIVMLMKWFCQNQQLDLSLDLWGYLIDRGYCPHGHALDLLVTGLCSHGKVKEAVECAKQT 456

Query: 266 LERGRHLSKTCFRVLERYLTEMGDEDKLRKLDQMIKKLQIALPPSRGHAIGITSLN 99
           LERGR +S+  FR+LERYL E G+ + L KLDQMIKKL   LPPSRGHAIG+ S N
Sbjct: 457 LERGRPMSEGVFRMLERYLVEAGEGEMLWKLDQMIKKLHTVLPPSRGHAIGLASSN 512


>ref|XP_003554843.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g61360-like [Glycine max]
          Length = 491

 Score =  156 bits (394), Expect = 2e-36
 Identities = 71/114 (62%), Positives = 92/114 (80%)
 Frame = -3

Query: 446 TVVMLMKIFCKNRKVDEALGFWRYLVERGYCPHSHAVDVLVRSLCSHGRVAEAFECSVQI 267
           TVVMLMK FC+N ++D ++  W+YLVE+GYCPH+HA+D+LV  LC+ G V +AFECS Q+
Sbjct: 373 TVVMLMKYFCQNYRLDLSVCLWKYLVEKGYCPHAHALDLLVTGLCARGLVHDAFECSKQM 432

Query: 266 LERGRHLSKTCFRVLERYLTEMGDEDKLRKLDQMIKKLQIALPPSRGHAIGITS 105
           LERGRH+S   F +LER+L +  D DKL++LDQMIKKLQ  LPPSRGHA GI++
Sbjct: 433 LERGRHMSNASFLMLERFLLQASDMDKLKELDQMIKKLQTVLPPSRGHATGIST 486


>ref|XP_002272860.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61360
           [Vitis vinifera] gi|296081020|emb|CBI18524.3| unnamed
           protein product [Vitis vinifera]
          Length = 513

 Score =  155 bits (391), Expect = 4e-36
 Identities = 71/114 (62%), Positives = 90/114 (78%)
 Frame = -3

Query: 446 TVVMLMKIFCKNRKVDEALGFWRYLVERGYCPHSHAVDVLVRSLCSHGRVAEAFECSVQI 267
           T+VMLMK FC+N+++D +L  W YL++RGYCPH HA+D+LV  LCSHG+V EA EC+ Q 
Sbjct: 397 TIVMLMKWFCQNQQLDLSLDLWGYLIDRGYCPHGHALDLLVTGLCSHGKVKEAVECAKQT 456

Query: 266 LERGRHLSKTCFRVLERYLTEMGDEDKLRKLDQMIKKLQIALPPSRGHAIGITS 105
           LERGR +S+  FR+LERYL E G+ + L KLDQMIKKL   LPPSRGHAIG+ +
Sbjct: 457 LERGRPMSEGVFRMLERYLVEAGEGEMLWKLDQMIKKLHTVLPPSRGHAIGLAT 510


>ref|XP_003621136.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355496151|gb|AES77354.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 821

 Score =  149 bits (376), Expect = 2e-34
 Identities = 70/113 (61%), Positives = 87/113 (76%)
 Frame = -3

Query: 446 TVVMLMKIFCKNRKVDEALGFWRYLVERGYCPHSHAVDVLVRSLCSHGRVAEAFECSVQI 267
           TVV+LMK FC N ++D +L  W YLVE+G+CPH+HA+D+LV  LCS G V EAF CS Q 
Sbjct: 393 TVVVLMKYFCHNSRLDLSLSLWNYLVEKGHCPHAHALDLLVTGLCSRGLVQEAFSCSKQT 452

Query: 266 LERGRHLSKTCFRVLERYLTEMGDEDKLRKLDQMIKKLQIALPPSRGHAIGIT 108
           LERGR++S T F +LER L +  D DKL++LDQMIKKL+  LPPSRGHA GI+
Sbjct: 453 LERGRYISSTAFLMLERLLKQSRDVDKLKELDQMIKKLRSVLPPSRGHATGIS 505


>gb|ABN08951.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 511

 Score =  149 bits (376), Expect = 2e-34
 Identities = 70/113 (61%), Positives = 87/113 (76%)
 Frame = -3

Query: 446 TVVMLMKIFCKNRKVDEALGFWRYLVERGYCPHSHAVDVLVRSLCSHGRVAEAFECSVQI 267
           TVV+LMK FC N ++D +L  W YLVE+G+CPH+HA+D+LV  LCS G V EAF CS Q 
Sbjct: 393 TVVVLMKYFCHNSRLDLSLSLWNYLVEKGHCPHAHALDLLVTGLCSRGLVQEAFSCSKQT 452

Query: 266 LERGRHLSKTCFRVLERYLTEMGDEDKLRKLDQMIKKLQIALPPSRGHAIGIT 108
           LERGR++S T F +LER L +  D DKL++LDQMIKKL+  LPPSRGHA GI+
Sbjct: 453 LERGRYISSTAFLMLERLLKQSRDVDKLKELDQMIKKLRSVLPPSRGHATGIS 505


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