BLASTX nr result

ID: Atractylodes22_contig00046826 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00046826
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524843.1| pentatricopeptide repeat-containing protein,...    89   3e-16
ref|XP_003633296.1| PREDICTED: putative pentatricopeptide repeat...    86   2e-15
emb|CBI28823.3| unnamed protein product [Vitis vinifera]               86   2e-15
ref|XP_002332100.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14
ref|XP_004171455.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...    83   3e-14

>ref|XP_002524843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535903|gb|EEF37563.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 524

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 53/117 (45%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
 Frame = +2

Query: 164 RFIKNSNKINQIHSLLVTDGHLHSIPN-SSASKWTPTLLYNTLIRAYLNIHLPHTTLLLF 340
           RFIK  N++ QIHSLL+T  HL   P  SS SKW  TL YNTL RAYLN    + T+ LF
Sbjct: 15  RFIKCQNQVEQIHSLLLTKAHLLFNPTISSHSKWKSTLFYNTLTRAYLNFGQTYNTVYLF 74

Query: 341 TYMLSRNIPPNTHXXXXXXXXXXXXXXXXXXXXXXXXISEPLYAQALKRGVLVDPFV 511
           T ML+   PPN+H                        I   L+ Q +KRGVL DPFV
Sbjct: 75  TLMLAHQTPPNSH---------TFPSLIKAATLSFPSIGTSLHTQVIKRGVLCDPFV 122


>ref|XP_003633296.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g10330-like [Vitis vinifera]
          Length = 531

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 47/114 (41%), Positives = 61/114 (53%)
 Frame = +2

Query: 170 IKNSNKINQIHSLLVTDGHLHSIPNSSASKWTPTLLYNTLIRAYLNIHLPHTTLLLFTYM 349
           IK+  +I Q+HSLL+T+GHL    N+S  KW  TLLYN+LIR YLN   PH TLL+FT+M
Sbjct: 24  IKHPKQIKQVHSLLITNGHLLPCSNASNLKWMATLLYNSLIRGYLNFVEPHKTLLIFTHM 83

Query: 350 LSRNIPPNTHXXXXXXXXXXXXXXXXXXXXXXXXISEPLYAQALKRGVLVDPFV 511
           L+   PPN                          I  PL+   +KRG+  D F+
Sbjct: 84  LAHQAPPNN-----LTFPSIIKKAASCSPSLAFMIGTPLHTHVIKRGLSHDLFI 132


>emb|CBI28823.3| unnamed protein product [Vitis vinifera]
          Length = 410

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 47/114 (41%), Positives = 61/114 (53%)
 Frame = +2

Query: 170 IKNSNKINQIHSLLVTDGHLHSIPNSSASKWTPTLLYNTLIRAYLNIHLPHTTLLLFTYM 349
           IK+  +I Q+HSLL+T+GHL    N+S  KW  TLLYN+LIR YLN   PH TLL+FT+M
Sbjct: 24  IKHPKQIKQVHSLLITNGHLLPCSNASNLKWMATLLYNSLIRGYLNFVEPHKTLLIFTHM 83

Query: 350 LSRNIPPNTHXXXXXXXXXXXXXXXXXXXXXXXXISEPLYAQALKRGVLVDPFV 511
           L+   PPN                          I  PL+   +KRG+  D F+
Sbjct: 84  LAHQAPPNN-----LTFPSIIKKAASCSPSLAFMIGTPLHTHVIKRGLSHDLFI 132


>ref|XP_002332100.1| predicted protein [Populus trichocarpa] gi|222874920|gb|EEF12051.1|
           predicted protein [Populus trichocarpa]
          Length = 474

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 51/118 (43%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
 Frame = +2

Query: 167 FIKNSNKINQIHSLLVTDGHLHSIPNSSA---SKWTPTLLYNTLIRAYLNIHLPHTTLLL 337
           FIK+ N++ QIHSLL T G L   PN+S    SKW  TLL+NTL RAYLN      TL L
Sbjct: 16  FIKHQNQVKQIHSLLTTKGLLFYNPNTSPNDNSKWKTTLLFNTLNRAYLNFGQHQQTLHL 75

Query: 338 FTYMLSRNIPPNTHXXXXXXXXXXXXXXXXXXXXXXXXISEPLYAQALKRGVLVDPFV 511
           F  ML+   PPN+H                        I   L+ QA+ RGVL DPF+
Sbjct: 76  FALMLAHQTPPNSH---------TFPSVIKAATHSCLFIGTSLHTQAINRGVLYDPFI 124


>ref|XP_004171455.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g10330-like [Cucumis
           sativus]
          Length = 477

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 52/117 (44%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
 Frame = +2

Query: 164 RFIKNSNKINQIHSLLVTDGHL-HSIPNSSASKWTPTLLYNTLIRAYLNIHLPHTTLLLF 340
           RF+KNS KI QIH+LL+T GHL ++   SS  K   TLLYNTLIRAYLN + P   LLL+
Sbjct: 16  RFLKNSTKIPQIHALLLTQGHLFNNSQTSSNPKCLITLLYNTLIRAYLNFNRPRFALLLY 75

Query: 341 TYMLSRNIPPNTHXXXXXXXXXXXXXXXXXXXXXXXXISEPLYAQALKRGVLVDPFV 511
           T MLS+   PN H                        + + ++A A K GVL DP V
Sbjct: 76  TQMLSQQTKPNFH---------TFPSIIKSATICSSLLPKLIHAHAFKIGVLTDPVV 123


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