BLASTX nr result

ID: Atractylodes22_contig00046818 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00046818
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283959.1| PREDICTED: replication protein A 70 kDa DNA-...   128   6e-28
ref|XP_002328669.1| predicted protein [Populus trichocarpa] gi|2...   127   7e-28
emb|CAN71402.1| hypothetical protein VITISV_006284 [Vitis vinifera]   127   7e-28
ref|XP_002514651.1| replication factor A 1, rfa1, putative [Rici...   127   9e-28
emb|CBI15109.3| unnamed protein product [Vitis vinifera]              122   4e-26

>ref|XP_002283959.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit isoform
           1 [Vitis vinifera]
          Length = 625

 Score =  128 bits (321), Expect = 6e-28
 Identities = 67/99 (67%), Positives = 73/99 (73%), Gaps = 12/99 (12%)
 Frame = +1

Query: 1   EVKVEVKSEGAGTLL------------KVGEAGIVLKPKQELITKSAAQIIHEQNGNMAP 144
           E K EVKSE  G LL            K    GI LKPKQE++ KSAAQI++EQ+GNMAP
Sbjct: 109 EFKTEVKSEETGILLRPKQVVEIQREVKTEGTGIFLKPKQEIVAKSAAQIVNEQHGNMAP 168

Query: 145 SARMAMTRRVHPLASLNPYQGNWTIKVRLTAKGNMRTYK 261
           +ARMAMTRRVHPL SLNPYQGNWTIKVRLT KG MRTYK
Sbjct: 169 AARMAMTRRVHPLVSLNPYQGNWTIKVRLTNKGTMRTYK 207


>ref|XP_002328669.1| predicted protein [Populus trichocarpa] gi|222838845|gb|EEE77196.1|
           predicted protein [Populus trichocarpa]
          Length = 603

 Score =  127 bits (320), Expect = 7e-28
 Identities = 60/85 (70%), Positives = 71/85 (83%)
 Frame = +1

Query: 7   KVEVKSEGAGTLLKVGEAGIVLKPKQELITKSAAQIIHEQNGNMAPSARMAMTRRVHPLA 186
           K EV S      +K    G++LKPKQE++ KSAAQI+HEQ+GNMAP+ARMAMTRRVHPL 
Sbjct: 102 KCEVVSPALEKEIKEEAKGLILKPKQEIVAKSAAQIVHEQHGNMAPAARMAMTRRVHPLV 161

Query: 187 SLNPYQGNWTIKVRLTAKGNMRTYK 261
           SLNPYQGNWTIKVR+T+KGNMRTY+
Sbjct: 162 SLNPYQGNWTIKVRVTSKGNMRTYR 186


>emb|CAN71402.1| hypothetical protein VITISV_006284 [Vitis vinifera]
          Length = 634

 Score =  127 bits (320), Expect = 7e-28
 Identities = 67/99 (67%), Positives = 73/99 (73%), Gaps = 12/99 (12%)
 Frame = +1

Query: 1   EVKVEVKSEGAGTLL------------KVGEAGIVLKPKQELITKSAAQIIHEQNGNMAP 144
           E K EVKSE  G LL            K    GI LKPKQE++ KSAAQI++EQ+GNMAP
Sbjct: 109 EFKTEVKSEETGILLXPKQVVEIQXEVKXEGTGIFLKPKQEIVAKSAAQIVNEQHGNMAP 168

Query: 145 SARMAMTRRVHPLASLNPYQGNWTIKVRLTAKGNMRTYK 261
           +ARMAMTRRVHPL SLNPYQGNWTIKVRLT KG MRTYK
Sbjct: 169 AARMAMTRRVHPLVSLNPYQGNWTIKVRLTNKGTMRTYK 207


>ref|XP_002514651.1| replication factor A 1, rfa1, putative [Ricinus communis]
           gi|223546255|gb|EEF47757.1| replication factor A 1,
           rfa1, putative [Ricinus communis]
          Length = 622

 Score =  127 bits (319), Expect = 9e-28
 Identities = 64/97 (65%), Positives = 75/97 (77%), Gaps = 10/97 (10%)
 Frame = +1

Query: 1   EVKVEVKSEGAGTLLKVGE----------AGIVLKPKQELITKSAAQIIHEQNGNMAPSA 150
           E+K E K+E A   LK  +           GI+LKPKQE++ KSAAQI+HEQ+ NMAP+A
Sbjct: 109 EIKDEAKTEEAAITLKPKQETQVIKQEVSGGILLKPKQEMVAKSAAQIVHEQHKNMAPTA 168

Query: 151 RMAMTRRVHPLASLNPYQGNWTIKVRLTAKGNMRTYK 261
           RMAMTRRVHPL SLNPYQGNWTIKVR+T+KGNMRTYK
Sbjct: 169 RMAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYK 205


>emb|CBI15109.3| unnamed protein product [Vitis vinifera]
          Length = 602

 Score =  122 bits (305), Expect = 4e-26
 Identities = 61/86 (70%), Positives = 70/86 (81%)
 Frame = +1

Query: 4   VKVEVKSEGAGTLLKVGEAGIVLKPKQELITKSAAQIIHEQNGNMAPSARMAMTRRVHPL 183
           ++VE K+E       V   GI LKPKQE++ KSAAQI++EQ+GNMAP+ARMAMTRRVHPL
Sbjct: 106 LEVEFKTE-------VKRTGIFLKPKQEIVAKSAAQIVNEQHGNMAPAARMAMTRRVHPL 158

Query: 184 ASLNPYQGNWTIKVRLTAKGNMRTYK 261
            SLNPYQGNWTIKVRLT KG MRTYK
Sbjct: 159 VSLNPYQGNWTIKVRLTNKGTMRTYK 184


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