BLASTX nr result

ID: Atractylodes22_contig00046804 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00046804
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597140.1| CCR4-NOT transcription complex subunit [Medi...    97   2e-18
ref|XP_002326330.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
ref|XP_002323448.1| predicted protein [Populus trichocarpa] gi|2...    96   3e-18
ref|NP_190149.1| CCR4-NOT transcription complex subunit 4 [Arabi...    96   4e-18
ref|XP_004148249.1| PREDICTED: uncharacterized protein LOC101221...    92   4e-17

>ref|XP_003597140.1| CCR4-NOT transcription complex subunit [Medicago truncatula]
           gi|355486188|gb|AES67391.1| CCR4-NOT transcription
           complex subunit [Medicago truncatula]
          Length = 1007

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 49/79 (62%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
 Frame = -3

Query: 235 GLEANFQRVAAN-SSSRKQKLAKAKPKPNEGRKDLSNVRVIQRKMAYIIGLPLDLADEEL 59
           G+ AN +R+ A     RK K  KAK K ++GRK LSNVRVI+R + YI+GLPLDLADE+L
Sbjct: 67  GMAANCERLVAEVHMERKMKSQKAKSKSSDGRKQLSNVRVIRRNLVYIVGLPLDLADEDL 126

Query: 58  LQRKDNFGQYGKVTKVSLS 2
           LQR++ FGQYGKV KVS+S
Sbjct: 127 LQRREYFGQYGKVLKVSMS 145


>ref|XP_002326330.1| predicted protein [Populus trichocarpa] gi|222833523|gb|EEE72000.1|
           predicted protein [Populus trichocarpa]
          Length = 257

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 51/79 (64%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
 Frame = -3

Query: 235 GLEANFQRVAANS-SSRKQKLAKAKPKPNEGRKDLSNVRVIQRKMAYIIGLPLDLADEEL 59
           G+ AN +R+ A   S RK K  K KPK ++GR  LSNVRVIQR + YIIGLPL+LADE L
Sbjct: 67  GMAANCERLVAEMHSERKLKSHKVKPKTSDGRMHLSNVRVIQRNLVYIIGLPLNLADESL 126

Query: 58  LQRKDNFGQYGKVTKVSLS 2
           LQRK+ FGQYGKV KVS+S
Sbjct: 127 LQRKEYFGQYGKVLKVSIS 145


>ref|XP_002323448.1| predicted protein [Populus trichocarpa] gi|222868078|gb|EEF05209.1|
           predicted protein [Populus trichocarpa]
          Length = 258

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 50/79 (63%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
 Frame = -3

Query: 235 GLEANFQRVAAN-SSSRKQKLAKAKPKPNEGRKDLSNVRVIQRKMAYIIGLPLDLADEEL 59
           G+ AN +R+ A  +S RK K  K KPK +EGR  LSNVRVIQR + YIIGLPL++ADE L
Sbjct: 67  GMAANCERLVAEMNSERKLKSHKGKPKISEGRMHLSNVRVIQRNLVYIIGLPLNIADESL 126

Query: 58  LQRKDNFGQYGKVTKVSLS 2
           LQR++ FGQYGKV KVS+S
Sbjct: 127 LQRREYFGQYGKVLKVSIS 145


>ref|NP_190149.1| CCR4-NOT transcription complex subunit 4 [Arabidopsis thaliana]
           gi|6996266|emb|CAB75492.1| putative protein [Arabidopsis
           thaliana] gi|332644532|gb|AEE78053.1| CCR4-NOT
           transcription complex subunit 4 [Arabidopsis thaliana]
          Length = 989

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 43/78 (55%), Positives = 64/78 (82%)
 Frame = -3

Query: 235 GLEANFQRVAANSSSRKQKLAKAKPKPNEGRKDLSNVRVIQRKMAYIIGLPLDLADEELL 56
           G+  + +R+A+  +  ++K+ K+KPK ++GRK L++VRV+QR + YI+GLPL+LADE+LL
Sbjct: 67  GMTVDQERLASEGNMDRKKIQKSKPKSSDGRKPLTSVRVVQRNLVYIVGLPLNLADEDLL 126

Query: 55  QRKDNFGQYGKVTKVSLS 2
           QRK+ FGQYGKV KVS+S
Sbjct: 127 QRKEYFGQYGKVLKVSMS 144


>ref|XP_004148249.1| PREDICTED: uncharacterized protein LOC101221790 [Cucumis sativus]
           gi|449515295|ref|XP_004164685.1| PREDICTED:
           uncharacterized protein LOC101225784 [Cucumis sativus]
          Length = 1092

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 48/79 (60%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
 Frame = -3

Query: 235 GLEANFQRVAANSS-SRKQKLAKAKPKPNEGRKDLSNVRVIQRKMAYIIGLPLDLADEEL 59
           G+ ++  R+AA  S  +K K  KAK K +EGRK LS+VRVIQR + YI+GLPL+LADE+L
Sbjct: 67  GMASSCGRLAAEISVEKKVKSQKAKAKSSEGRKQLSSVRVIQRNLVYIVGLPLNLADEDL 126

Query: 58  LQRKDNFGQYGKVTKVSLS 2
           LQR++ FGQYGKV KVS+S
Sbjct: 127 LQRREYFGQYGKVLKVSMS 145


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