BLASTX nr result

ID: Atractylodes22_contig00046762 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00046762
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003614030.1| Pentatricopeptide repeat-containing protein ...    72   6e-11
ref|XP_002531859.1| Cell division protein ftsH, putative [Ricinu...    65   1e-09
ref|XP_002324059.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_004166988.1| PREDICTED: pentatricopeptide repeat-containi...    63   1e-08
ref|XP_004148551.1| PREDICTED: pentatricopeptide repeat-containi...    63   3e-08

>ref|XP_003614030.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355515365|gb|AES96988.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 498

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 36/80 (45%), Positives = 55/80 (68%)
 Frame = +1

Query: 142 PTNMSWNNVMRTSAMIKGINVDLERETILIFKRMRCSGIRPIELSYGSLFKACASLVALE 321
           P+ +SWN ++R  A     + D   E+I +FK+MR +G++P +L+Y  +FK+CA  + L 
Sbjct: 74  PSPISWNILIRGYA-----SSDSPIESIWVFKKMRENGVKPNKLTYPFIFKSCAMALVLC 128

Query: 322 EGRQIHVDCLKRGLDSDVYV 381
           EG+Q+H D +K GLDSDVYV
Sbjct: 129 EGKQVHADLVKFGLDSDVYV 148


>ref|XP_002531859.1| Cell division protein ftsH, putative [Ricinus communis]
           gi|223528509|gb|EEF30537.1| Cell division protein ftsH,
           putative [Ricinus communis]
          Length = 1157

 Score = 65.1 bits (157), Expect(2) = 1e-09
 Identities = 31/80 (38%), Positives = 50/80 (62%)
 Frame = +1

Query: 142 PTNMSWNNVMRTSAMIKGINVDLERETILIFKRMRCSGIRPIELSYGSLFKACASLVALE 321
           P  + WN ++R  A     + +  ++ + +++ MR  GIRP  L++  L KACA+  A +
Sbjct: 727 PVPLPWNILIRGYA-----DSNTPKDALFVYRNMRNEGIRPNSLTFPFLLKACAACFATK 781

Query: 322 EGRQIHVDCLKRGLDSDVYV 381
           EG+Q+HV+ +K GLD DVYV
Sbjct: 782 EGKQVHVEVIKYGLDCDVYV 801



 Score = 21.9 bits (45), Expect(2) = 1e-09
 Identities = 8/31 (25%), Positives = 19/31 (61%)
 Frame = +3

Query: 72  IKSCTSMKVVLQIHALLLITRFHSNKHVMEQ 164
           +K C+S+K + QIH+ + ++    +  ++ Q
Sbjct: 671 LKLCSSIKHLYQIHSQIQVSGLQGDTFLVTQ 701


>ref|XP_002324059.1| predicted protein [Populus trichocarpa] gi|222867061|gb|EEF04192.1|
           predicted protein [Populus trichocarpa]
          Length = 505

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 36/84 (42%), Positives = 50/84 (59%)
 Frame = +1

Query: 130 LDSIPTNMSWNNVMRTSAMIKGINVDLERETILIFKRMRCSGIRPIELSYGSLFKACASL 309
           LDS+P    WN ++R  A     + D  +  I +F RMR  G+ P   ++  + KACA+ 
Sbjct: 81  LDSLPP---WNFLIRGYA-----SGDAPKNAIRVFHRMRKEGVGPNNFTFPFVLKACATC 132

Query: 310 VALEEGRQIHVDCLKRGLDSDVYV 381
           +ALEEG+Q+H D  K GLD DVYV
Sbjct: 133 LALEEGKQVHADIFKFGLDCDVYV 156


>ref|XP_004166988.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g36730-like [Cucumis sativus]
          Length = 516

 Score = 62.8 bits (151), Expect(2) = 1e-08
 Identities = 33/77 (42%), Positives = 46/77 (59%)
 Frame = +1

Query: 151 MSWNNVMRTSAMIKGINVDLERETILIFKRMRCSGIRPIELSYGSLFKACASLVALEEGR 330
           M WN ++R  +     + D  +E I +F  MR  G+RP  L++  L KACA+L  L+EG+
Sbjct: 97  MPWNFIIRGYS-----SSDSPQEAISLFGEMRRRGVRPNNLTFPFLLKACATLATLQEGK 151

Query: 331 QIHVDCLKRGLDSDVYV 381
           Q H   +K GLD DVYV
Sbjct: 152 QFHAIAIKCGLDLDVYV 168



 Score = 21.2 bits (43), Expect(2) = 1e-08
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +3

Query: 72  IKSCTSMKVVLQIHALLLIT 131
           +K C+S   + +IHA +L++
Sbjct: 37  LKHCSSTNHLFEIHAQILVS 56


>ref|XP_004148551.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g36730-like [Cucumis sativus]
          Length = 516

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 33/77 (42%), Positives = 46/77 (59%)
 Frame = +1

Query: 151 MSWNNVMRTSAMIKGINVDLERETILIFKRMRCSGIRPIELSYGSLFKACASLVALEEGR 330
           M WN ++R  +     + D  +E I +F  MR  G+RP  L++  L KACA+L  L+EG+
Sbjct: 97  MPWNFIIRGYS-----SSDSPQEAISLFGEMRRRGVRPNNLTFPFLLKACATLATLQEGK 151

Query: 331 QIHVDCLKRGLDSDVYV 381
           Q H   +K GLD DVYV
Sbjct: 152 QFHAIAIKCGLDLDVYV 168


Top