BLASTX nr result

ID: Atractylodes22_contig00046757 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00046757
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537198.1| PREDICTED: pentatricopeptide repeat-containi...    66   3e-09
gb|ADE77782.1| unknown [Picea sitchensis]                              65   6e-09
gb|ADE77505.1| unknown [Picea sitchensis]                              65   6e-09
gb|ADE76547.1| unknown [Picea sitchensis]                              62   5e-08
ref|NP_178983.1| pentatricopeptide repeat-containing protein [Ar...    62   5e-08

>ref|XP_003537198.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49740-like [Glycine max]
          Length = 722

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 29/47 (61%), Positives = 37/47 (78%)
 Frame = +1

Query: 1   EEDKSGVYVLLSNILANAGHWEEAADVRKMMRSYGVVKQPGYSWIRS 141
           + +   VYVLLSNI A AG WEEAA++R+MMR +G +KQPG SWIR+
Sbjct: 676 DHNNPSVYVLLSNICAAAGQWEEAANLREMMREFGTIKQPGCSWIRT 722


>gb|ADE77782.1| unknown [Picea sitchensis]
          Length = 210

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 28/41 (68%), Positives = 35/41 (85%)
 Frame = +1

Query: 13  SGVYVLLSNILANAGHWEEAADVRKMMRSYGVVKQPGYSWI 135
           +G+YVLLSNI A AG W++AA VRK+M+  GV+KQPGYSWI
Sbjct: 41  AGIYVLLSNIYAAAGQWDDAAKVRKLMKDRGVMKQPGYSWI 81


>gb|ADE77505.1| unknown [Picea sitchensis]
          Length = 514

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 28/41 (68%), Positives = 35/41 (85%)
 Frame = +1

Query: 13  SGVYVLLSNILANAGHWEEAADVRKMMRSYGVVKQPGYSWI 135
           +G+YVLLSNI A AG W++AA VRK+M+  GV+KQPGYSWI
Sbjct: 345 AGIYVLLSNIYAAAGQWDDAAKVRKLMKDRGVMKQPGYSWI 385


>gb|ADE76547.1| unknown [Picea sitchensis]
          Length = 210

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/54 (53%), Positives = 39/54 (72%), Gaps = 2/54 (3%)
 Frame = +1

Query: 7   DKSGVYVLLSNILANAGHWEEAADVRKMMRSYGVVKQPGYSWIRS*N--HTSSV 162
           D++G YV LSNI + AG W+EAA +R++M   GV K+PGYSW++  N  HT SV
Sbjct: 39  DRAGTYVALSNIYSAAGRWDEAAKLRRLMNDRGVKKEPGYSWVQVKNMVHTFSV 92


>ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g13600 gi|4558664|gb|AAD22682.1| hypothetical protein
           [Arabidopsis thaliana] gi|330251150|gb|AEC06244.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 697

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 34/67 (50%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
 Frame = +1

Query: 1   EEDKSGVYVLLSNILANAGHWEEAADVRKMMRSYGVVKQPGYSWIR--S*NHTSSVAGKE 174
           E   SG YVLLSN+ A  G WE+  +VRK MR  GV KQPG SWI+    +H   V  K 
Sbjct: 591 EPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKS 650

Query: 175 VTRKVQI 195
             RK QI
Sbjct: 651 HPRKKQI 657


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