BLASTX nr result

ID: Atractylodes22_contig00046741 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00046741
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313087.1| predicted protein [Populus trichocarpa] gi|2...    86   2e-15
emb|CBI32449.3| unnamed protein product [Vitis vinifera]               83   3e-14
ref|XP_002281969.1| PREDICTED: pentatricopeptide repeat-containi...    83   3e-14
ref|XP_002521838.1| pentatricopeptide repeat-containing protein,...    82   4e-14
ref|XP_003588289.1| Pentatricopeptide repeat-containing protein ...    76   2e-12

>ref|XP_002313087.1| predicted protein [Populus trichocarpa] gi|222849495|gb|EEE87042.1|
           predicted protein [Populus trichocarpa]
          Length = 538

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 38/50 (76%), Positives = 44/50 (88%)
 Frame = +2

Query: 2   TLQKKSLTCKVKRKGRLFWIGLLGSNSTWFWKLVEPYIVGDLKDLLKPGN 151
           TL+ KSL C+VKRKG++FWIG LGS STWFWKLVEPYI+ DLKDLLK G+
Sbjct: 465 TLKSKSLDCRVKRKGKVFWIGFLGSVSTWFWKLVEPYILDDLKDLLKAGD 514


>emb|CBI32449.3| unnamed protein product [Vitis vinifera]
          Length = 790

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 34/49 (69%), Positives = 43/49 (87%)
 Frame = +2

Query: 2   TLQKKSLTCKVKRKGRLFWIGLLGSNSTWFWKLVEPYIVGDLKDLLKPG 148
           TL+ +S+ C+VKRKG +FWIGLLGSNSTWFWKL+EPYI+ D+KD +K G
Sbjct: 716 TLKAQSMDCRVKRKGTVFWIGLLGSNSTWFWKLIEPYILDDVKDFVKAG 764


>ref|XP_002281969.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15820-like [Vitis vinifera]
          Length = 823

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 34/49 (69%), Positives = 43/49 (87%)
 Frame = +2

Query: 2   TLQKKSLTCKVKRKGRLFWIGLLGSNSTWFWKLVEPYIVGDLKDLLKPG 148
           TL+ +S+ C+VKRKG +FWIGLLGSNSTWFWKL+EPYI+ D+KD +K G
Sbjct: 749 TLKAQSMDCRVKRKGTVFWIGLLGSNSTWFWKLIEPYILDDVKDFVKAG 797


>ref|XP_002521838.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538876|gb|EEF40474.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 835

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 36/50 (72%), Positives = 42/50 (84%)
 Frame = +2

Query: 2   TLQKKSLTCKVKRKGRLFWIGLLGSNSTWFWKLVEPYIVGDLKDLLKPGN 151
           TL+ KSL CKVKRKGR+FWIG LG++S WFWKLVEPYI+ DLK  LK G+
Sbjct: 760 TLKSKSLNCKVKRKGRVFWIGFLGNDSVWFWKLVEPYILDDLKLFLKAGD 809


>ref|XP_003588289.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|357469333|ref|XP_003604951.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
           gi|357520985|ref|XP_003630781.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
           gi|355477337|gb|AES58540.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
           gi|355506006|gb|AES87148.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
           gi|355524803|gb|AET05257.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 775

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 35/59 (59%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
 Frame = +2

Query: 17  SLTCKVKRKGRLFWIGLLGSNSTWFWKLVEPYIVGDLKDLLKPG-NISSDPKEEPRTIN 190
           S+ CKVK KG++FWIG+LGSN+TWFWKLVEPYI+ D+KD  K G N       E + IN
Sbjct: 710 SIDCKVKGKGKVFWIGILGSNTTWFWKLVEPYILEDVKDFSKAGVNTMGQDLTETQDIN 768


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