BLASTX nr result

ID: Atractylodes22_contig00046733 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00046733
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...    52   8e-12
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...    53   1e-10
ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811...    55   5e-09
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...    57   7e-09
ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777...    55   2e-08

>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score = 52.4 bits (124), Expect(2) = 8e-12
 Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
 Frame = +1

Query: 7    ITHLCFSDDFLMFCHGDVV*LK----ILKDAVDDLSGLKPNIPKSTTYFCNVDHDVKESI 174
            +THLCF+DD ++F  G    L+    I KD     SGL  ++ KST +  ++  +   SI
Sbjct: 953  LTHLCFADDIMVFSAGSAHSLEGVLAIFKDFAA-FSGLNISLEKSTLFMASISSETCASI 1011

Query: 175  LQLLPFHEGEHPVCYLGCLFTSQRL 249
            L   PF  G  PV YLG    ++R+
Sbjct: 1012 LARFPFDSGSLPVRYLGLPLMTKRM 1036



 Score = 42.4 bits (98), Expect(2) = 8e-12
 Identities = 18/28 (64%), Positives = 23/28 (82%)
 Frame = +2

Query: 245  DCRV*LDKVRYRICNWKNKFLSFAGRLQ 328
            DC   L+K+R RI +WKN+FLS+AGRLQ
Sbjct: 1040 DCLPLLEKIRSRISSWKNRFLSYAGRLQ 1067


>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score = 53.1 bits (126), Expect(2) = 1e-10
 Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
 Frame = +1

Query: 1    LRITHLCFSDDFLMFCHGDVV*LK---ILKDAVDDLSGLKPNIPKSTTYFCNVDHDVKES 171
            + +THLCF+DD ++F  G    ++    + +    +S LK ++ KST +   +  + K S
Sbjct: 843  MNLTHLCFADDIMVFSDGTSKSIQGTLAIFEKFAAMSWLKISLEKSTIFMAGISPNAKTS 902

Query: 172  ILQLLPFHEGEHPVCYLGCLFTSQRL 249
            ILQ  PF  G  PV YLG    ++R+
Sbjct: 903  ILQQFPFELGTLPVKYLGLPLLTKRM 928



 Score = 37.4 bits (85), Expect(2) = 1e-10
 Identities = 15/23 (65%), Positives = 20/23 (86%)
 Frame = +2

Query: 260  LDKVRYRICNWKNKFLSFAGRLQ 328
            ++K+R RI +W N+FLSFAGRLQ
Sbjct: 937  VEKIRARITSWTNRFLSFAGRLQ 959


>ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811508 [Glycine max]
          Length = 1441

 Score = 55.5 bits (132), Expect(2) = 5e-09
 Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
 Frame = +1

Query: 7    ITHLCFSDDFLMFCHGDVV*LKILKDAV---DDLSGLKPNIPKSTTYFCNVDHDVKESIL 177
            +T+L F+DD L+FC GD   + ++ + +    D +GLK N  K   +F  +D   KE++ 
Sbjct: 1007 LTNLTFADDVLLFCRGDSKSVSMMMETIRKFSDSTGLKVNPAKCQMFFGGMDGCSKENLR 1066

Query: 178  QLLPFHEGEHPVCYLGCLFTSQRL 249
            ++  F EG+ PV YLG   + +RL
Sbjct: 1067 RITDFAEGKLPVRYLGVPLSCKRL 1090



 Score = 29.6 bits (65), Expect(2) = 5e-09
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = +2

Query: 260  LDKVRYRICNWKNKFLSFAGRLQ 328
            +DK+  R+ +W +K LS+AGR+Q
Sbjct: 1099 IDKIVDRVKHWTSKLLSYAGRIQ 1121


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score = 57.4 bits (137), Expect(2) = 7e-09
 Identities = 34/86 (39%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
 Frame = +1

Query: 1   LRITHLCFSDDFLMFCHGDVV*LKILKDAVDDLS---GLKPNIPKSTTYFCNVDHDVKES 171
           L ITHL F+DD LMFC  D   L  +  A    S   GL  +  KS  YFC VD +    
Sbjct: 681 LNITHLMFADDLLMFCRADKSSLDHMNVAFQKFSHASGLAASHEKSNIYFCGVDDETARE 740

Query: 172 ILQLLPFHEGEHPVCYLGCLFTSQRL 249
           +   +    GE P  YLG   TS++L
Sbjct: 741 LADYVHMQLGELPFRYLGVPLTSKKL 766



 Score = 27.3 bits (59), Expect(2) = 7e-09
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +2

Query: 233 LHHKDCRV*LDKVRYRICNWKNKFLSFAGRLQ 328
           L +  C+  ++ +  R   W  K LS+AGRLQ
Sbjct: 766 LTYAQCKPLVEMITNRAQTWMAKLLSYAGRLQ 797


>ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777167 [Glycine max]
          Length = 1324

 Score = 55.5 bits (132), Expect(2) = 2e-08
 Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
 Frame = +1

Query: 7    ITHLCFSDDFLMFCHGDVV*LKILKDAV---DDLSGLKPNIPKSTTYFCNVDHDVKESIL 177
            +T+L F+DD L+FC GD   + ++ + +    D +GLK N  K   +F  +D   KE++ 
Sbjct: 890  LTNLTFADDVLLFCRGDSKSVSMMMETIRKFSDSTGLKVNPAKCQMFFGGMDGCSKENLR 949

Query: 178  QLLPFHEGEHPVCYLGCLFTSQRL 249
            ++  F EG+ PV YLG   + +RL
Sbjct: 950  RITDFAEGKLPVRYLGMPLSCKRL 973



 Score = 28.1 bits (61), Expect(2) = 2e-08
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +2

Query: 260  LDKVRYRICNWKNKFLSFAGRLQ 328
            +DK+  R+ +W +K LS AGR+Q
Sbjct: 982  IDKIVDRVKHWTSKLLSHAGRIQ 1004


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