BLASTX nr result

ID: Atractylodes22_contig00046635 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00046635
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containi...   157   8e-37
emb|CBI26570.3| unnamed protein product [Vitis vinifera]              157   8e-37
emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]   157   8e-37
ref|XP_002519997.1| pentatricopeptide repeat-containing protein,...   154   9e-36
ref|XP_002309826.1| predicted protein [Populus trichocarpa] gi|2...   146   1e-33

>ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
            chloroplastic-like [Vitis vinifera]
          Length = 1442

 Score =  157 bits (397), Expect = 8e-37
 Identities = 81/118 (68%), Positives = 95/118 (80%), Gaps = 1/118 (0%)
 Frame = -3

Query: 357  RSGLLVAKAHSLRMWLKDSPFCLDLELKNSITLPETNSMQLIERCYIRRGLVPAFQDISA 178
            RSGLLVAKAHSLRMWLKDS FCLDLELK++ +LPE+NSMQL+E C++RRGLVPAF+DI+ 
Sbjct: 1314 RSGLLVAKAHSLRMWLKDSSFCLDLELKDAPSLPESNSMQLMEGCFLRRGLVPAFKDITE 1373

Query: 177  RLGQVRPKKFARLALLSDEKRDKAIQADIE-GXXXXXXXXXRFGVTRKNSSPKRKFVR 7
            RLG VRPKKFARLALL DEKRDK I+ADIE G         + GV R+    +RKF+R
Sbjct: 1374 RLGDVRPKKFARLALLPDEKRDKVIRADIEGGKEKLEKMKKKVGVKRRRKLVRRKFIR 1431


>emb|CBI26570.3| unnamed protein product [Vitis vinifera]
          Length = 1042

 Score =  157 bits (397), Expect = 8e-37
 Identities = 81/118 (68%), Positives = 95/118 (80%), Gaps = 1/118 (0%)
 Frame = -3

Query: 357  RSGLLVAKAHSLRMWLKDSPFCLDLELKNSITLPETNSMQLIERCYIRRGLVPAFQDISA 178
            RSGLLVAKAHSLRMWLKDS FCLDLELK++ +LPE+NSMQL+E C++RRGLVPAF+DI+ 
Sbjct: 904  RSGLLVAKAHSLRMWLKDSSFCLDLELKDAPSLPESNSMQLMEGCFLRRGLVPAFKDITE 963

Query: 177  RLGQVRPKKFARLALLSDEKRDKAIQADIE-GXXXXXXXXXRFGVTRKNSSPKRKFVR 7
            RLG VRPKKFARLALL DEKRDK I+ADIE G         + GV R+    +RKF+R
Sbjct: 964  RLGDVRPKKFARLALLPDEKRDKVIRADIEGGKEKLEKMKKKVGVKRRRKLVRRKFIR 1021


>emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
          Length = 1494

 Score =  157 bits (397), Expect = 8e-37
 Identities = 81/118 (68%), Positives = 95/118 (80%), Gaps = 1/118 (0%)
 Frame = -3

Query: 357  RSGLLVAKAHSLRMWLKDSPFCLDLELKNSITLPETNSMQLIERCYIRRGLVPAFQDISA 178
            RSGLLVAKAHSLRMWLKDS FCLDLELK++ +LPE+NSMQL+E C++RRGLVPAF+DI+ 
Sbjct: 1366 RSGLLVAKAHSLRMWLKDSSFCLDLELKDAPSLPESNSMQLMEGCFLRRGLVPAFKDITE 1425

Query: 177  RLGQVRPKKFARLALLSDEKRDKAIQADIE-GXXXXXXXXXRFGVTRKNSSPKRKFVR 7
            RLG VRPKKFARLALL DEKRDK I+ADIE G         + GV R+    +RKF+R
Sbjct: 1426 RLGDVRPKKFARLALLPDEKRDKVIRADIEGGKEKLEKMKKKVGVKRRRKLVRRKFIR 1483


>ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223540761|gb|EEF42321.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1429

 Score =  154 bits (388), Expect = 9e-36
 Identities = 81/123 (65%), Positives = 99/123 (80%), Gaps = 4/123 (3%)
 Frame = -3

Query: 357  RSGLLVAKAHSLRMWLKDSPFCLDLELKNSITLPETNSMQLIERCYIRRGLVPAFQDISA 178
            RSGLLVAKAHSLRMWLKDSPFCLDLELK++ +LPE+NSMQLIE C+IRRGLVPAF++I+ 
Sbjct: 1291 RSGLLVAKAHSLRMWLKDSPFCLDLELKDAPSLPESNSMQLIEGCFIRRGLVPAFKEINE 1350

Query: 177  RLGQVRPKKFARLALLSDEKRDKAIQADIEG-XXXXXXXXXRFGVTRKNSSPK---RKFV 10
            +LG VRPKKFA+LALLSD+KR KAI ADIEG          +  + RKN + K   R+F+
Sbjct: 1351 KLGFVRPKKFAKLALLSDDKRQKAIHADIEGRKEKLEKLKSKVDLERKNKTNKLRRRRFI 1410

Query: 9    RRE 1
            R++
Sbjct: 1411 RKD 1413


>ref|XP_002309826.1| predicted protein [Populus trichocarpa] gi|222852729|gb|EEE90276.1|
            predicted protein [Populus trichocarpa]
          Length = 1480

 Score =  146 bits (369), Expect = 1e-33
 Identities = 77/123 (62%), Positives = 94/123 (76%), Gaps = 5/123 (4%)
 Frame = -3

Query: 357  RSGLLVAKAHSLRMWLKDSPFCLDLELKNSITLPETNSMQLIERCYIRRGLVPAFQDISA 178
            RSGLL+AKAHSLRMWLKDSPFCLDLELKN+ +LPE+NSMQLIE C+IR GLVPAF++I+ 
Sbjct: 1348 RSGLLIAKAHSLRMWLKDSPFCLDLELKNAPSLPESNSMQLIEGCFIRSGLVPAFKEINE 1407

Query: 177  RLGQVRPKKFARLALLSDEKRDKAIQADIEGXXXXXXXXXRFGVTRKNSS-----PKRKF 13
            ++G VRPKKFA+ ALLSD++R+KAIQA IEG         + G   K  +      KRKF
Sbjct: 1408 KVGFVRPKKFAKFALLSDDRREKAIQAFIEGGKEKKEKMKKRGELGKKRNIKVMLRKRKF 1467

Query: 12   VRR 4
             R+
Sbjct: 1468 TRQ 1470


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