BLASTX nr result

ID: Atractylodes22_contig00046581 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00046581
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN05745.1| Polynucleotidyl transferase, Ribonuclease H fold ...    82   4e-14
emb|CAN83995.1| hypothetical protein VITISV_031192 [Vitis vinifera]    80   2e-13
emb|CAN68842.1| hypothetical protein VITISV_023226 [Vitis vinifera]    79   5e-13
emb|CAN79446.1| hypothetical protein VITISV_037463 [Vitis vinifera]    78   7e-13
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...    78   9e-13

>gb|ABN05745.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 93

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 37/67 (55%), Positives = 52/67 (77%)
 Frame = -1

Query: 288 SKNPTVYGRSKHIDTR*HFLRDKVAKKEIELEYCKSEDQVADIITKQLKYDAFIKLKQRM 109
           SK+P  +GRSKHI+TR HFLRD+V K ++E+ +CK+EDQV D++TK LK  +F  L+ R+
Sbjct: 27  SKHPVAHGRSKHIETRFHFLRDQVNKGKLEIMHCKTEDQVVDLLTKPLKISSFEYLRNRL 86

Query: 108 GMTSLSN 88
           GM+  SN
Sbjct: 87  GMSKTSN 93


>emb|CAN83995.1| hypothetical protein VITISV_031192 [Vitis vinifera]
          Length = 288

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 34/69 (49%), Positives = 53/69 (76%)
 Frame = -1

Query: 288 SKNPTVYGRSKHIDTR*HFLRDKVAKKEIELEYCKSEDQVADIITKQLKYDAFIKLKQRM 109
           SKNP ++GRS+HID R HFLRD   ++ ++L +C + DQVADI+TK LK + F+KL++++
Sbjct: 220 SKNPVMHGRSRHIDVRFHFLRDLTKEEVVKLVHCGTNDQVADILTKPLKLEVFLKLREKL 279

Query: 108 GMTSLSNLD 82
           G+  + NL+
Sbjct: 280 GVCEVPNLN 288


>emb|CAN68842.1| hypothetical protein VITISV_023226 [Vitis vinifera]
          Length = 1146

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 36/62 (58%), Positives = 48/62 (77%)
 Frame = -1

Query: 288  SKNPTVYGRSKHIDTR*HFLRDKVAKKEIELEYCKSEDQVADIITKQLKYDAFIKLKQRM 109
            SKNP ++GRSKHID R HFLRD      IEL++C +++QVADI+TK LK D F+KL++ M
Sbjct: 983  SKNPVMHGRSKHIDVRFHFLRDLTRDGVIELKHCVTQEQVADIMTKPLKLDVFLKLRESM 1042

Query: 108  GM 103
            G+
Sbjct: 1043 GV 1044


>emb|CAN79446.1| hypothetical protein VITISV_037463 [Vitis vinifera]
          Length = 1120

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 33/69 (47%), Positives = 52/69 (75%)
 Frame = -1

Query: 288  SKNPTVYGRSKHIDTR*HFLRDKVAKKEIELEYCKSEDQVADIITKQLKYDAFIKLKQRM 109
            SKNP ++GRSKH+D R HFLRD   ++ ++L +C + DQV DI+TK LK + F+KL++++
Sbjct: 1052 SKNPVMHGRSKHMDVRFHFLRDLAKEEVVKLVHCGTNDQVVDILTKPLKLEVFLKLREKL 1111

Query: 108  GMTSLSNLD 82
            G+  + NL+
Sbjct: 1112 GVCEVPNLN 1120



 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 31/62 (50%), Positives = 47/62 (75%)
 Frame = -1

Query: 288 SKNPTVYGRSKHIDTR*HFLRDKVAKKEIELEYCKSEDQVADIITKQLKYDAFIKLKQRM 109
           SKN  ++GRSKHID R HFLRD   ++ ++L +C + DQV DI+TK LK + F+KL++++
Sbjct: 18  SKNLVMHGRSKHIDVRFHFLRDLTKEEVVKLVHCGTNDQVVDILTKSLKLEVFLKLREKL 77

Query: 108 GM 103
           G+
Sbjct: 78  GV 79


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 35/66 (53%), Positives = 50/66 (75%)
 Frame = -1

Query: 288  SKNPTVYGRSKHIDTR*HFLRDKVAKKEIELEYCKSEDQVADIITKQLKYDAFIKLKQRM 109
            +KNP  + RSKHIDTR H++R+ V+KK+++LEY K+ DQVADI TK LK + FIK++  +
Sbjct: 1280 AKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADIFTKPLKREDFIKMRSLL 1339

Query: 108  GMTSLS 91
            G+   S
Sbjct: 1340 GVAKSS 1345


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