BLASTX nr result
ID: Atractylodes22_contig00046554
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00046554
(341 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 39 2e-08
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 39 2e-08
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 39 2e-08
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] 39 3e-08
emb|CAD40782.2| OSJNBb0012E08.6 [Oryza sativa Japonica Group] 35 4e-08
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 38.9 bits (89), Expect(3) = 2e-08
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = +1
Query: 271 YLSQKGYIKEVLCQFNIHDAKSV 339
YLSQKGYI++VL +FN+HDAK V
Sbjct: 1271 YLSQKGYIEKVLRRFNMHDAKPV 1293
Score = 34.3 bits (77), Expect(3) = 2e-08
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +3
Query: 81 YDSYVYYKKCDDGFXXXXXXXXXXXXXAVEYEEDSRIKEPFQLNVEFDMKNLGAENKI-- 254
YDS VY K D A + E +++K QL+ EF+MK+LGA KI
Sbjct: 1201 YDSCVYLKVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKA--QLSSEFEMKDLGAAKKILG 1258
Query: 255 MEIVR 269
MEI R
Sbjct: 1259 MEITR 1263
Score = 29.3 bits (64), Expect(3) = 2e-08
Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +2
Query: 2 LYSLKQSTRNW*K-FDTFMATHNLKR 76
LY LKQS R W K FD+FM + +R
Sbjct: 1173 LYGLKQSPRQWYKRFDSFMLSQKFRR 1198
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 38.5 bits (88), Expect(3) = 2e-08
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = +1
Query: 271 YLSQKGYIKEVLCQFNIHDAKSV 339
YLSQKGYI++VL +FN+HDAK +
Sbjct: 990 YLSQKGYIEKVLRRFNMHDAKPI 1012
Score = 34.3 bits (77), Expect(3) = 2e-08
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +3
Query: 81 YDSYVYYKKCDDGFXXXXXXXXXXXXXAVEYEEDSRIKEPFQLNVEFDMKNLGAENKI-- 254
YDS VY K D A + E +++K QL+ EF+MK+LGA KI
Sbjct: 920 YDSCVYLKVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKA--QLSSEFEMKDLGAAKKILG 977
Query: 255 MEIVR 269
MEI R
Sbjct: 978 MEITR 982
Score = 29.3 bits (64), Expect(3) = 2e-08
Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +2
Query: 2 LYSLKQSTRNW*K-FDTFMATHNLKR 76
LY LKQS R W K FD+FM + +R
Sbjct: 892 LYGLKQSPRQWYKRFDSFMLSQKFRR 917
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 38.5 bits (88), Expect(3) = 2e-08
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = +1
Query: 271 YLSQKGYIKEVLCQFNIHDAKSV 339
YLSQKGYI++VL +FN+HDAK +
Sbjct: 822 YLSQKGYIEKVLRRFNMHDAKPI 844
Score = 34.3 bits (77), Expect(3) = 2e-08
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +3
Query: 81 YDSYVYYKKCDDGFXXXXXXXXXXXXXAVEYEEDSRIKEPFQLNVEFDMKNLGAENKI-- 254
YDS VY K D A + E +++K QL+ EF+MK+LGA KI
Sbjct: 752 YDSCVYLKVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKA--QLSSEFEMKDLGAAKKILG 809
Query: 255 MEIVR 269
MEI R
Sbjct: 810 MEITR 814
Score = 29.3 bits (64), Expect(3) = 2e-08
Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +2
Query: 2 LYSLKQSTRNW*K-FDTFMATHNLKR 76
LY LKQS R W K FD+FM + +R
Sbjct: 724 LYGLKQSPRQWYKRFDSFMLSQKFRR 749
>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 38.9 bits (89), Expect(3) = 3e-08
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = +1
Query: 271 YLSQKGYIKEVLCQFNIHDAKSV 339
YLSQKGYI++VL +FN+HDAK V
Sbjct: 943 YLSQKGYIEKVLRRFNMHDAKPV 965
Score = 33.9 bits (76), Expect(3) = 3e-08
Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +3
Query: 81 YDSYVYYKKCDDGFXXXXXXXXXXXXXAVEYEEDSRIKEPFQLNVEFDMKNLGAENKI-- 254
YDS VY K D A + E ++K QL+ EF+MK+LGA KI
Sbjct: 873 YDSCVYLKVVDGSSIYLLLYVDDMLIAAKDKSEIEKLKA--QLSSEFEMKDLGAAKKILG 930
Query: 255 MEIVR 269
MEI R
Sbjct: 931 MEITR 935
Score = 28.9 bits (63), Expect(3) = 3e-08
Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +2
Query: 2 LYSLKQSTRNW*K-FDTFMATHNLKR 76
LY LKQS R W K FD+FM + +R
Sbjct: 845 LYGLKQSPRQWYKRFDSFMFSQKFRR 870
>emb|CAD40782.2| OSJNBb0012E08.6 [Oryza sativa Japonica Group]
Length = 375
Score = 35.0 bits (79), Expect(3) = 4e-08
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = +1
Query: 271 YLSQKGYIKEVLCQFNIHDAKSV 339
+LSQ+ YIK+VL +FN+HDAK V
Sbjct: 121 FLSQQSYIKKVLQRFNMHDAKPV 143
Score = 33.5 bits (75), Expect(3) = 4e-08
Identities = 16/26 (61%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +2
Query: 2 LYSLKQSTRNW*K-FDTFMATHNLKR 76
LY LKQS R W K FD+FM +H KR
Sbjct: 23 LYGLKQSPRQWYKRFDSFMLSHGFKR 48
Score = 32.7 bits (73), Expect(3) = 4e-08
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +3
Query: 81 YDSYVYYKKCDDGFXXXXXXXXXXXXXAVEYEEDSRIKEPFQLNVEFDMKNLGAENKI-- 254
+DS VY K + A E+ + +K+ QL+ EFDMKNLGA KI
Sbjct: 51 FDSCVYIKFVNGSPIYLLLYVDDMLIAAKSKEQITTLKK--QLSSEFDMKNLGAAKKILG 108
Query: 255 MEIVR 269
MEI R
Sbjct: 109 MEITR 113