BLASTX nr result

ID: Atractylodes22_contig00046546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00046546
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...    66   3e-09
gb|ACJ85145.1| unknown [Medicago truncatula] gi|388517775|gb|AFK...    66   3e-09
ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...    61   1e-07
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    59   5e-07
ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...    57   2e-06

>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/57 (52%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
 Frame = +3

Query: 6    ERRRKGLCFRCGQLFGPT-HKCPEGNLRVMLLADDEIVADDGEILCLESDHLIQTEE 173
            ERR KGLCF+CG  + PT HKCPE +LRV++L + E V ++GEI+ LE+  +++ EE
Sbjct: 934  ERRAKGLCFKCGGKYHPTLHKCPEKSLRVLILGEGEGVNEEGEIVSLETQEVLEEEE 990


>gb|ACJ85145.1| unknown [Medicago truncatula] gi|388517775|gb|AFK46949.1| unknown
           [Medicago truncatula]
          Length = 185

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/57 (52%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
 Frame = +3

Query: 6   ERRRKGLCFRCGQLFGPT-HKCPEGNLRVMLLADDEIVADDGEILCLESDHLIQTEE 173
           ERR KGLCF+CG  + PT HKCPE +LRV++L + E V ++GEI+ LE+  +++ EE
Sbjct: 3   ERRAKGLCFKCGGKYHPTLHKCPEKSLRVLILGEGEGVNEEGEIVSLETQEVLEEEE 59


>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/49 (55%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
 Frame = +3

Query: 6   ERRRKGLCFRCGQLFGPT-HKCPEGNLRVMLLADDEIVADDGEILCLES 149
           ERR KGLCF+CG  + PT HKCPE  LRV++L + E + D+GEI+ +E+
Sbjct: 309 ERRAKGLCFKCGGKYHPTLHKCPERALRVLILGEGEALNDEGEIMAMEA 357


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
           finger, CCHC-type; Peptidase aspartic, active site;
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 1297

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/57 (47%), Positives = 39/57 (68%)
 Frame = +3

Query: 6   ERRRKGLCFRCGQLFGPTHKCPEGNLRVMLLADDEIVADDGEILCLESDHLIQTEEG 176
           ER++KGLCF+CG  F P H+CP+  LRV++L +DE    +G++L +E D     EEG
Sbjct: 106 ERKQKGLCFKCGGPFHPMHQCPDKQLRVLVLEEDEEGEPEGKLLAVEVD---DEEEG 159


>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/58 (48%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
 Frame = +3

Query: 3   EERRRKGLCFRCGQLFGPT-HKCPEGNLRVMLLADDEIVADDGEILCLESDHLIQTEE 173
           EERR KGLCF+CG  + PT HKC E  LRV++L + E +  +GEI+ ++ D  +++EE
Sbjct: 324 EERRAKGLCFKCGGKYHPTFHKCLERALRVLILGEGETMTKEGEIVSMK-DVTVESEE 380


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