BLASTX nr result

ID: Atractylodes22_contig00046521 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00046521
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFD98847.1| vernalization insensitive 3 [Solanum lycopersicum]     161   6e-38
ref|XP_002531036.1| conserved hypothetical protein [Ricinus comm...   149   2e-34
ref|XP_002270335.1| PREDICTED: protein VERNALIZATION INSENSITIVE...   149   2e-34
gb|AEZ06404.1| VIN3B-like protein [Aquilegia coerulea]                148   4e-34
ref|XP_002329653.1| predicted protein [Populus trichocarpa] gi|2...   148   4e-34

>gb|AFD98847.1| vernalization insensitive 3 [Solanum lycopersicum]
          Length = 739

 Score =  161 bits (407), Expect = 6e-38
 Identities = 78/141 (55%), Positives = 98/141 (69%)
 Frame = -2

Query: 424 SWSRQDILQILCAETGKDRKYTGLTXXXXXXXXXKVVADKKSQEDKNKSMIDLESSANGH 245
           SWSRQ+ILQILCAE GK+RKYTGLT         K+V++KKS E +N S ++++ S+   
Sbjct: 44  SWSRQEILQILCAEMGKERKYTGLTKLKIIENLLKIVSEKKSLEQENTSNLEMQPSSESG 103

Query: 244 GRGTKRQRKTDHPNNLNISMDDSLIHIVDCDPAYSETKLCKNSACRAKLSQEDAFCKRCS 65
            R +KRQRK +HP+   I  + S     + + + +    CKN ACRAKLS +DAFCKRCS
Sbjct: 104 QRSSKRQRKAEHPSRFPIEANTS--STTNTNVSLANVVYCKNLACRAKLSGQDAFCKRCS 161

Query: 64  CCICHQYDDNKDPSLWLICSS 2
           CCIC  YDDNKDPSLWLICSS
Sbjct: 162 CCICRNYDDNKDPSLWLICSS 182


>ref|XP_002531036.1| conserved hypothetical protein [Ricinus communis]
           gi|223529389|gb|EEF31353.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 710

 Score =  149 bits (377), Expect = 2e-34
 Identities = 76/141 (53%), Positives = 95/141 (67%)
 Frame = -2

Query: 424 SWSRQDILQILCAETGKDRKYTGLTXXXXXXXXXKVVADKKSQEDKNKSMIDLESSANGH 245
           SWSRQ+ILQILC E GK+RKYTGLT         K+V++KK+ E +  +  + ESS    
Sbjct: 23  SWSRQEILQILCVEMGKERKYTGLTKLKIIEHLLKIVSEKKAGECEVTTDAETESSPASV 82

Query: 244 GRGTKRQRKTDHPNNLNISMDDSLIHIVDCDPAYSETKLCKNSACRAKLSQEDAFCKRCS 65
            R +KRQRK D+P+ L + ++ +       D A      CKNSACRA L Q+DAFCKRCS
Sbjct: 83  RRSSKRQRKIDNPSRLTVPVNYTATSNAGNDLA--NVIYCKNSACRATLKQDDAFCKRCS 140

Query: 64  CCICHQYDDNKDPSLWLICSS 2
           CCIC++YDDNKDPSLWL CSS
Sbjct: 141 CCICYKYDDNKDPSLWLTCSS 161


>ref|XP_002270335.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Vitis
           vinifera]
          Length = 738

 Score =  149 bits (376), Expect = 2e-34
 Identities = 82/145 (56%), Positives = 96/145 (66%), Gaps = 4/145 (2%)
 Frame = -2

Query: 424 SWSRQDILQILCAETGKDRKYTGLTXXXXXXXXXKVVADKKS--QEDKNKSMIDLES--S 257
           SWSRQ+ILQILCAE GK+RKYTGLT         +VV++K S  QE      I+ ES  S
Sbjct: 43  SWSRQEILQILCAEMGKERKYTGLTKLKIIEHLLRVVSEKNSVEQEVVTNHEINHESQPS 102

Query: 256 ANGHGRGTKRQRKTDHPNNLNISMDDSLIHIVDCDPAYSETKLCKNSACRAKLSQEDAFC 77
           A  + R +KRQRK DHP+ L ++ ++  I   D D        CKN ACRA LS+E  FC
Sbjct: 103 AATNQRTSKRQRKADHPSRLPVAANNHSISNGDGD--LGNAIYCKNLACRANLSREYEFC 160

Query: 76  KRCSCCICHQYDDNKDPSLWLICSS 2
           KRCSCCICHQYDDNKDPSLWL CSS
Sbjct: 161 KRCSCCICHQYDDNKDPSLWLTCSS 185


>gb|AEZ06404.1| VIN3B-like protein [Aquilegia coerulea]
          Length = 732

 Score =  148 bits (374), Expect = 4e-34
 Identities = 71/141 (50%), Positives = 95/141 (67%)
 Frame = -2

Query: 424 SWSRQDILQILCAETGKDRKYTGLTXXXXXXXXXKVVADKKSQEDKNKSMIDLESSANGH 245
           SWSR+++LQILCAETGK+RKYTGLT           V + KS + K+++ +D +  +  +
Sbjct: 35  SWSRRELLQILCAETGKERKYTGLTKSRIIDHLLTSVCETKSIKRKDEADVDSKPLSTNN 94

Query: 244 GRGTKRQRKTDHPNNLNISMDDSLIHIVDCDPAYSETKLCKNSACRAKLSQEDAFCKRCS 65
            + TKRQRKTD+P+ L +++  +       +     +K C N ACRA L Q+D+FCKRCS
Sbjct: 95  NQSTKRQRKTDNPSRLPVAVPSN------SNGDIVNSKCCPNLACRATLHQDDSFCKRCS 148

Query: 64  CCICHQYDDNKDPSLWLICSS 2
           CCIC QYDDNKDPSLWL CSS
Sbjct: 149 CCICFQYDDNKDPSLWLFCSS 169


>ref|XP_002329653.1| predicted protein [Populus trichocarpa] gi|222870534|gb|EEF07665.1|
           predicted protein [Populus trichocarpa]
          Length = 679

 Score =  148 bits (374), Expect = 4e-34
 Identities = 77/141 (54%), Positives = 94/141 (66%)
 Frame = -2

Query: 424 SWSRQDILQILCAETGKDRKYTGLTXXXXXXXXXKVVADKKSQEDKNKSMIDLESSANGH 245
           SWSRQ+ILQILCAE GK+RKYTGLT         K+V++KKS E +    ++ + SA   
Sbjct: 25  SWSRQEILQILCAEMGKERKYTGLTKLKIIEHLLKLVSEKKSGECEASPDLETKISAASI 84

Query: 244 GRGTKRQRKTDHPNNLNISMDDSLIHIVDCDPAYSETKLCKNSACRAKLSQEDAFCKRCS 65
              +KRQRKTD+P+ + +S+  S +   +       T  CKNSACRA L   D FCKRCS
Sbjct: 85  QGASKRQRKTDNPSRVPVSL--SCVATNNGISDQGNTVYCKNSACRATLRPADTFCKRCS 142

Query: 64  CCICHQYDDNKDPSLWLICSS 2
           CCIC QYDDNKDPSLWLICSS
Sbjct: 143 CCICRQYDDNKDPSLWLICSS 163


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