BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00046428
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsu...   127   1e-27
ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containi...   123   2e-26
emb|CBI31119.3| unnamed protein product [Vitis vinifera]              120   9e-26
ref|XP_002526196.1| pentatricopeptide repeat-containing protein,...   108   6e-22
ref|XP_003553254.1| PREDICTED: pentatricopeptide repeat-containi...    90   2e-16

>gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsutum]
           gi|227462998|gb|ACP39951.1| pentatricopeptide repeat
           protein [Gossypium hirsutum]
          Length = 532

 Score =  127 bits (318), Expect = 1e-27
 Identities = 60/99 (60%), Positives = 77/99 (77%)
 Frame = +3

Query: 6   TMSHINQIHAHLIGSGSISDPFAAGKLLFSCTVSTHADLQHAYTLFRSIPHRSTYIWNTM 185
           TMS I Q+H+HLI S S  DPFAAGK++    VS++AD+ HAY LF S+PHR+T+IWNT+
Sbjct: 22  TMSQIKQMHSHLIVSASRLDPFAAGKIISLFAVSSNADISHAYKLFLSLPHRTTFIWNTI 81

Query: 186 IRAFGEQDKSRHALSLFKRMFSCGFLPTNHTFSFVLRAC 302
           IR F E++++  ALSL+K M   GFLP N+TFSFVLRAC
Sbjct: 82  IRIFVEKNENATALSLYKNMLQTGFLPNNYTFSFVLRAC 120


>ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 537

 Score =  123 bits (308), Expect = 2e-26
 Identities = 55/101 (54%), Positives = 76/101 (75%)
 Frame = +3

Query: 3   LTMSHINQIHAHLIGSGSISDPFAAGKLLFSCTVSTHADLQHAYTLFRSIPHRSTYIWNT 182
           +TM+HI QI +HL  SG++ DPFAAG+++  C VS   D+ HAY LF S+P R+++IWNT
Sbjct: 24  VTMAHIKQIQSHLTVSGTLFDPFAAGRIISFCAVSAQGDISHAYLLFLSLPRRTSFIWNT 83

Query: 183 MIRAFGEQDKSRHALSLFKRMFSCGFLPTNHTFSFVLRACA 305
           M+RAF ++ +    LSL+K M S GFLP N+TFSF+L+ACA
Sbjct: 84  MLRAFTDKKEPATVLSLYKYMLSTGFLPNNYTFSFLLQACA 124


>emb|CBI31119.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score =  120 bits (302), Expect = 9e-26
 Identities = 54/99 (54%), Positives = 74/99 (74%)
 Frame = +3

Query: 9   MSHINQIHAHLIGSGSISDPFAAGKLLFSCTVSTHADLQHAYTLFRSIPHRSTYIWNTMI 188
           M+HI QI +HL  SG++ DPFAAG+++  C VS   D+ HAY LF S+P R+++IWNTM+
Sbjct: 1   MAHIKQIQSHLTVSGTLFDPFAAGRIISFCAVSAQGDISHAYLLFLSLPRRTSFIWNTML 60

Query: 189 RAFGEQDKSRHALSLFKRMFSCGFLPTNHTFSFVLRACA 305
           RAF ++ +    LSL+K M S GFLP N+TFSF+L+ACA
Sbjct: 61  RAFTDKKEPATVLSLYKYMLSTGFLPNNYTFSFLLQACA 99


>ref|XP_002526196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534500|gb|EEF36200.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 491

 Score =  108 bits (269), Expect = 6e-22
 Identities = 50/100 (50%), Positives = 70/100 (70%), Gaps = 1/100 (1%)
 Frame = +3

Query: 6   TMSHINQIHAHLIGSGSISDPFAAGKLLFSCTVSTHA-DLQHAYTLFRSIPHRSTYIWNT 182
           T+S I QI  HL  SG++ DP+AA K++  C +S++   L HAY LF  + HRST+IWNT
Sbjct: 22  TISQIKQIQTHLTVSGTLKDPYAAAKIISFCALSSNQFSLSHAYRLFLGLRHRSTFIWNT 81

Query: 183 MIRAFGEQDKSRHALSLFKRMFSCGFLPTNHTFSFVLRAC 302
           +IRAF E+++ R A+ LFK M    FLP N+T+SF+ +AC
Sbjct: 82  VIRAFAEKNEPRKAIMLFKNMLYSNFLPNNYTYSFLFKAC 121


>ref|XP_003553254.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 465

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 45/101 (44%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
 Frame = +3

Query: 6   TMSHINQIHAHLIGSGSIS-DPFAAGKLLFSCTVSTHADLQHAYTLFRSIPHRSTYIWNT 182
           T+  + Q+HA +I S  ++ DPFAA +L FSC +S   DL  A+ +F S P  ++++WNT
Sbjct: 30  TLDQLKQVHAQMIVSAVVATDPFAASRLFFSCALSPFGDLSLAFRIFHSTPRPNSFMWNT 89

Query: 183 MIRAFGEQDKSRHALSLFKRMFSCGFLPTNHTFSFVLRACA 305
           +IRA   Q  + HALSL+  M     LP  HTF F+L+ACA
Sbjct: 90  LIRA---QTHAPHALSLYVAMRRSNVLPGKHTFPFLLKACA 127