BLASTX nr result

ID: Atractylodes22_contig00046419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00046419
         (560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519274.1| RNA binding protein, putative [Ricinus commu...   163   2e-38
ref|XP_002277366.2| PREDICTED: uncharacterized protein LOC100266...   154   9e-36
ref|XP_003594681.1| RNA binding protein [Medicago truncatula] gi...   154   9e-36
emb|CBI39618.3| unnamed protein product [Vitis vinifera]              154   9e-36
ref|XP_002512533.1| hypothetical protein RCOM_1435690 [Ricinus c...   145   6e-33

>ref|XP_002519274.1| RNA binding protein, putative [Ricinus communis]
           gi|223541589|gb|EEF43138.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 524

 Score =  163 bits (412), Expect = 2e-38
 Identities = 81/150 (54%), Positives = 97/150 (64%)
 Frame = -1

Query: 533 TTSYPKALKLQPKYGKKEPNFSDGTRVEVTSDEEGYHGSWYAATVVGSVGEGKLLVQYDT 354
           T S    LK++    K EP F  GTRVEV SDEEGY G+W+ A ++G++G  KLLVQY  
Sbjct: 158 TESSKVRLKIKCSSRKSEPMFRTGTRVEVKSDEEGYVGAWFDANIIGTIGNDKLLVQYLN 217

Query: 353 LTTDDEMQPLVEMAYCSNLRPLPPIINRHYRFSILEEVDAWYNDGWWVGLVSEVLAGMKY 174
           L TDDE  PL E+    + RP PP I     F   E+VD W+N+GWW G VSEVL G KY
Sbjct: 218 LVTDDETAPLREVISAEHARPCPPPIPSDAGFKEFEKVDVWFNEGWWEGQVSEVLPGSKY 277

Query: 173 AVYFWTTNEELVLEHSKLRPHQELIDQKWV 84
            VYF +TNEEL  +HS LR HQ+ ID KWV
Sbjct: 278 MVYFRSTNEELEFDHSSLRHHQKWIDGKWV 307



 Score =  129 bits (323), Expect = 4e-28
 Identities = 63/132 (47%), Positives = 83/132 (62%)
 Frame = -1

Query: 473 FSDGTRVEVTSDEEGYHGSWYAATVVGSVGEGKLLVQYDTLTTDDEMQPLVEMAYCSNLR 294
           FS GT VEV S+  G+ G+W+AAT++  +   K  V+Y  L TDDE   L E A  S++R
Sbjct: 391 FSKGTMVEVRSNAVGFQGAWFAATILNVMENDKFEVKYQRLLTDDETDFLREQASASDIR 450

Query: 293 PLPPIINRHYRFSILEEVDAWYNDGWWVGLVSEVLAGMKYAVYFWTTNEELVLEHSKLRP 114
           P PP I   Y + + E VDAWYND WWVG +++V    KY V+F TT EEL   H +LRP
Sbjct: 451 PSPPHIEHDYPYRLFEMVDAWYNDAWWVGRIAKVHTNSKYTVHFKTT-EELEFGHYELRP 509

Query: 113 HQELIDQKWVAS 78
           HQE ++  WV +
Sbjct: 510 HQEWVNGYWVTA 521



 Score = 65.5 bits (158), Expect = 6e-09
 Identities = 49/160 (30%), Positives = 81/160 (50%), Gaps = 9/160 (5%)
 Frame = -1

Query: 476 NFSDGTRVEVTSDEEGYHG-SWYAATVVGSVGEGK--LLVQYDTLTT--DDEMQPLVEMA 312
           +F  G +VEV   E G +  ++YAATV+ S  + K  +L++Y TL     D  +P+ E+ 
Sbjct: 8   HFKKGDQVEVLKQENGPNTLTYYAATVLRSPAKLKTQILIKYQTLMNAESDARKPITELV 67

Query: 311 YCSNLRPLPP--IINRHYRFSILEEVDAWYNDGWWVGLVSEVLAGMKYAVYFWTTNEELV 138
             + +RP+PP  +I     F   + VD + ++GW  G V ++L   K+ V F   +E +V
Sbjct: 68  DLARVRPMPPRELIE---CFKNGDSVDVFCDNGWQKGTVKDILENSKFVVGFDGKSEGIV 124

Query: 137 LEHSKLRPHQEL--IDQKWVASFLRPKLPAKPRLEKVKIQ 24
            E   LR H++    +  WV   L  K+      E  K++
Sbjct: 125 AEQRNLRLHRDWDHDESSWVPPLLENKVLPATDTESSKVR 164


>ref|XP_002277366.2| PREDICTED: uncharacterized protein LOC100266586 [Vitis vinifera]
          Length = 296

 Score =  154 bits (389), Expect = 9e-36
 Identities = 75/160 (46%), Positives = 108/160 (67%), Gaps = 1/160 (0%)
 Frame = -1

Query: 560 QEWIDQEWITTSYPKALKLQPKYGKKEPN-FSDGTRVEVTSDEEGYHGSWYAATVVGSVG 384
           +EWI+  W+     + +K + K      + FS+GT VEV+SDE+G+ G+W+AAT+V  +G
Sbjct: 129 REWINGNWVPPLEEEKVKTEEKSAVDVSSVFSEGTLVEVSSDEDGFQGAWFAATIVKVIG 188

Query: 383 EGKLLVQYDTLTTDDEMQPLVEMAYCSNLRPLPPIINRHYRFSILEEVDAWYNDGWWVGL 204
           + KL+++Y +L TDD+   L E     ++RP PP      RF++LEEVDA YNDGWWVG+
Sbjct: 189 KDKLMIEYKSLRTDDDTDFLREEVDALHIRPYPPETVVVDRFNLLEEVDALYNDGWWVGV 248

Query: 203 VSEVLAGMKYAVYFWTTNEELVLEHSKLRPHQELIDQKWV 84
           +S+VL+   Y VYF +TNEE+  +HS LR HQ+ ID KWV
Sbjct: 249 ISKVLSRSCYVVYFRSTNEEMKFDHSDLRLHQDWIDGKWV 288



 Score =  108 bits (269), Expect = 8e-22
 Identities = 60/156 (38%), Positives = 88/156 (56%), Gaps = 5/156 (3%)
 Frame = -1

Query: 473 FSDGTRVEVTSDEEGYHGSWYAATVVGSVGEGK----LLVQYDTLTTDDE-MQPLVEMAY 309
           F  G  +E++SDE+G+ G+W+A TVV    + K    ++V+Y T+  D+    PL E   
Sbjct: 4   FKKGAEIEISSDEDGFRGAWFAGTVVKPPAKKKNKTLVVVEYKTIMADESGANPLRETMD 63

Query: 308 CSNLRPLPPIINRHYRFSILEEVDAWYNDGWWVGLVSEVLAGMKYAVYFWTTNEELVLEH 129
              LRP PP   R   F I EEVDA+YNDGWW G+++E     ++AV+F T+ E+L    
Sbjct: 64  VLQLRPPPPR-ERSRTFQISEEVDAYYNDGWWEGVITEAHENSRFAVFFRTSREQLEFSE 122

Query: 128 SKLRPHQELIDQKWVASFLRPKLPAKPRLEKVKIQT 21
           + LR H+E I+  WV           P LE+ K++T
Sbjct: 123 NDLRLHREWINGNWV-----------PPLEEEKVKT 147


>ref|XP_003594681.1| RNA binding protein [Medicago truncatula]
           gi|355483729|gb|AES64932.1| RNA binding protein
           [Medicago truncatula]
          Length = 471

 Score =  154 bits (389), Expect = 9e-36
 Identities = 79/142 (55%), Positives = 93/142 (65%), Gaps = 3/142 (2%)
 Frame = -1

Query: 488 KKEPNFSDGTRVEVTSDEEGYHGSWYAATVVGSVGEGKLLVQYDTLTTDDEMQPLVEMAY 309
           K + +F  GT VEV SDE+GY GSWY ATVV     GK LV+Y TL TDD  Q L E+  
Sbjct: 250 KFDLHFYKGTNVEVKSDEQGYEGSWYPATVVDLYQNGKYLVEYSTLKTDDLTQQLKEVVD 309

Query: 308 CSNLRPLPPIINRHYRFSILEEVDAWYNDGWWVGLVSEV---LAGMKYAVYFWTTNEELV 138
            S++RP PP I+   R+   E VDAWYNDGWW G+VS V   L G KY VYFWT+NE L 
Sbjct: 310 VSDIRPRPPDIDHFCRYVRQEWVDAWYNDGWWEGVVSNVGHGLNGFKYQVYFWTSNEVLE 369

Query: 137 LEHSKLRPHQELIDQKWVASFL 72
            EH+ LRPHQ  ID +WV + L
Sbjct: 370 FEHNHLRPHQYWIDGRWVLASL 391



 Score =  127 bits (320), Expect = 9e-28
 Identities = 69/158 (43%), Positives = 92/158 (58%), Gaps = 10/158 (6%)
 Frame = -1

Query: 521 PKALKLQPKYG---------KKEPNFSDGTRVEVTSDEEGYHGSWYAATVVGSVGEGKLL 369
           P+ +K +PK           K EP F  G  VEV+SDEEGY G+W+ AT++ ++G  K L
Sbjct: 42  PQEIKKEPKVKIKFKFTGKPKNEPKFRKGEIVEVSSDEEGYQGAWFVATIIDTLGNEKFL 101

Query: 368 VQY-DTLTTDDEMQPLVEMAYCSNLRPLPPIINRHYRFSILEEVDAWYNDGWWVGLVSEV 192
           V++ D L  D  ++ L E      +RP PP +     F  L+EVDAWYNDGWW G+V E+
Sbjct: 102 VEHRDLLMNDGGIEVLKEEIETKFIRPCPPHVPMFGSFKRLQEVDAWYNDGWWEGMVVEL 161

Query: 191 LAGMKYAVYFWTTNEELVLEHSKLRPHQELIDQKWVAS 78
           +   +  V F   NE L  E SKLRPHQ+ ID KW+ S
Sbjct: 162 VNSEECYVRF-RNNEVLKFESSKLRPHQDWIDGKWIMS 198


>emb|CBI39618.3| unnamed protein product [Vitis vinifera]
          Length = 315

 Score =  154 bits (389), Expect = 9e-36
 Identities = 75/160 (46%), Positives = 108/160 (67%), Gaps = 1/160 (0%)
 Frame = -1

Query: 560 QEWIDQEWITTSYPKALKLQPKYGKKEPN-FSDGTRVEVTSDEEGYHGSWYAATVVGSVG 384
           +EWI+  W+     + +K + K      + FS+GT VEV+SDE+G+ G+W+AAT+V  +G
Sbjct: 148 REWINGNWVPPLEEEKVKTEEKSAVDVSSVFSEGTLVEVSSDEDGFQGAWFAATIVKVIG 207

Query: 383 EGKLLVQYDTLTTDDEMQPLVEMAYCSNLRPLPPIINRHYRFSILEEVDAWYNDGWWVGL 204
           + KL+++Y +L TDD+   L E     ++RP PP      RF++LEEVDA YNDGWWVG+
Sbjct: 208 KDKLMIEYKSLRTDDDTDFLREEVDALHIRPYPPETVVVDRFNLLEEVDALYNDGWWVGV 267

Query: 203 VSEVLAGMKYAVYFWTTNEELVLEHSKLRPHQELIDQKWV 84
           +S+VL+   Y VYF +TNEE+  +HS LR HQ+ ID KWV
Sbjct: 268 ISKVLSRSCYVVYFRSTNEEMKFDHSDLRLHQDWIDGKWV 307



 Score =  108 bits (269), Expect = 8e-22
 Identities = 60/156 (38%), Positives = 88/156 (56%), Gaps = 5/156 (3%)
 Frame = -1

Query: 473 FSDGTRVEVTSDEEGYHGSWYAATVVGSVGEGK----LLVQYDTLTTDDE-MQPLVEMAY 309
           F  G  +E++SDE+G+ G+W+A TVV    + K    ++V+Y T+  D+    PL E   
Sbjct: 23  FKKGAEIEISSDEDGFRGAWFAGTVVKPPAKKKNKTLVVVEYKTIMADESGANPLRETMD 82

Query: 308 CSNLRPLPPIINRHYRFSILEEVDAWYNDGWWVGLVSEVLAGMKYAVYFWTTNEELVLEH 129
              LRP PP   R   F I EEVDA+YNDGWW G+++E     ++AV+F T+ E+L    
Sbjct: 83  VLQLRPPPPR-ERSRTFQISEEVDAYYNDGWWEGVITEAHENSRFAVFFRTSREQLEFSE 141

Query: 128 SKLRPHQELIDQKWVASFLRPKLPAKPRLEKVKIQT 21
           + LR H+E I+  WV           P LE+ K++T
Sbjct: 142 NDLRLHREWINGNWV-----------PPLEEEKVKT 166


>ref|XP_002512533.1| hypothetical protein RCOM_1435690 [Ricinus communis]
           gi|223548494|gb|EEF49985.1| hypothetical protein
           RCOM_1435690 [Ricinus communis]
          Length = 363

 Score =  145 bits (365), Expect = 6e-33
 Identities = 68/146 (46%), Positives = 97/146 (66%)
 Frame = -1

Query: 521 PKALKLQPKYGKKEPNFSDGTRVEVTSDEEGYHGSWYAATVVGSVGEGKLLVQYDTLTTD 342
           P  L++     + E NFS G  +EV+SDEEG+ G+W+AAT++ +VG+ K L++Y  L T+
Sbjct: 203 PTTLEVNHIEAETEENFSKGMEIEVSSDEEGFQGAWFAATIIEAVGKDKYLIEYKNLRTE 262

Query: 341 DEMQPLVEMAYCSNLRPLPPIINRHYRFSILEEVDAWYNDGWWVGLVSEVLAGMKYAVYF 162
           D+   L E    ++LRP PP I     F +L+EVDA YNDGWWVG++S+VLA  KY VYF
Sbjct: 263 DDTDFLREEIDIAHLRPCPPEIIMVNSFKLLDEVDALYNDGWWVGVISKVLADCKYTVYF 322

Query: 161 WTTNEELVLEHSKLRPHQELIDQKWV 84
             T+EE+   HS+LR H + I  +W+
Sbjct: 323 RDTSEEMTFRHSELRLHHDWIAGEWI 348



 Score =  111 bits (277), Expect = 9e-23
 Identities = 58/149 (38%), Positives = 90/149 (60%), Gaps = 4/149 (2%)
 Frame = -1

Query: 521 PKALKLQPKYGKKEPNFSDGTRVEVTSDEEGYHGSWYAATVV---GSVGEGKLLVQYDTL 351
           PK+ K +P+   + P+F +GT VEV+SD++G+ GSWY   ++    S    K L++Y+ L
Sbjct: 3   PKS-KTKPRTPPQHPHFKNGTVVEVSSDDDGFRGSWYTGKIIKRASSRSPNKYLIEYEKL 61

Query: 350 TTDDE-MQPLVEMAYCSNLRPLPPIINRHYRFSILEEVDAWYNDGWWVGLVSEVLAGMKY 174
            +D+    PL E+   + LRPL P   +  RF   E+VDA++NDGWW G ++E     K+
Sbjct: 62  FSDESGKNPLKEILDLAQLRPLAPREKKR-RFRFGEKVDAYHNDGWWEGSITEECKDGKF 120

Query: 173 AVYFWTTNEELVLEHSKLRPHQELIDQKW 87
           AV+F  T E++V     LR H+E +D +W
Sbjct: 121 AVFFRGTREQIVFGEEDLRLHREWVDDQW 149


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