BLASTX nr result

ID: Atractylodes22_contig00046355 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00046355
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277896.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...   163   1e-38
ref|XP_003517045.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...   161   5e-38
ref|XP_004136192.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...   161   7e-38
ref|XP_002319229.1| predicted protein [Populus trichocarpa] gi|2...   160   9e-38
gb|ACU17851.1| unknown [Glycine max]                                  160   2e-37

>ref|XP_002277896.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Vitis
           vinifera]
          Length = 375

 Score =  163 bits (413), Expect = 1e-38
 Identities = 84/143 (58%), Positives = 100/143 (69%), Gaps = 5/143 (3%)
 Frame = -2

Query: 522 WPPYNGYRDCSQGICSIYCPQWCYIIXXXXXXXXXXXXXSGMNFSPLIIVVIGILASAFL 343
           W PY   +DCSQG CS+YCPQWCYI              SG NFSPL+I +IGILASAFL
Sbjct: 10  WVPYISTKDCSQGFCSLYCPQWCYIPAPPPPYFEFPDENSGPNFSPLVIAIIGILASAFL 69

Query: 342 LISYYTIISKYC----KGRGRNQ-LNPSLESENQNQSTTHDQWQHVANGLDESLIKSITV 178
           L+SYYTIISKYC    + R  NQ +N  LE +N N +  H+ W     GLDE+LIKSIT+
Sbjct: 70  LVSYYTIISKYCGNMERERRENQDINEELE-DNHNPAL-HEPWHVATTGLDEALIKSITL 127

Query: 177 CKYKKGDGVVEGSDYAVCLSEFK 109
           CKYKKGDG+VEG+D +VCLSEF+
Sbjct: 128 CKYKKGDGLVEGTDCSVCLSEFE 150


>ref|XP_003517045.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Glycine
           max]
          Length = 364

 Score =  161 bits (408), Expect = 5e-38
 Identities = 78/142 (54%), Positives = 96/142 (67%), Gaps = 3/142 (2%)
 Frame = -2

Query: 525 NWPPYNGYRDCSQGICSIYCPQWCYIIXXXXXXXXXXXXXSGMNFSPLIIVVIGILASAF 346
           +W PY   +DCSQG CS+YCPQWCY+I             S  NFSPL+I VIG+L SAF
Sbjct: 9   SWVPYMNNKDCSQGFCSLYCPQWCYVIYPPPPPFEFPDDDSSPNFSPLVIAVIGVLVSAF 68

Query: 345 LLISYYTIISKYCKGRGRNQLN---PSLESENQNQSTTHDQWQHVANGLDESLIKSITVC 175
           LL+SYYTIISKYC  R  +Q      ++E E  +  + H+ W     GLDE+LIKSITVC
Sbjct: 69  LLVSYYTIISKYCGSRESSQSENHEENVELEEDHNPSLHEPWHAPTIGLDEALIKSITVC 128

Query: 174 KYKKGDGVVEGSDYAVCLSEFK 109
           KYKKGDG+VE +D +VCLSEF+
Sbjct: 129 KYKKGDGLVEVTDCSVCLSEFQ 150


>ref|XP_004136192.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Cucumis
           sativus] gi|449532198|ref|XP_004173069.1| PREDICTED: E3
           ubiquitin-protein ligase Os04g0590900-like [Cucumis
           sativus]
          Length = 373

 Score =  161 bits (407), Expect = 7e-38
 Identities = 79/142 (55%), Positives = 96/142 (67%), Gaps = 4/142 (2%)
 Frame = -2

Query: 522 WPPYNGYRDCSQGICSIYCPQWCYIIXXXXXXXXXXXXXSGMNFSPLIIVVIGILASAFL 343
           W PY   +DCSQG CS+YCPQWCYI+              G +FSPL+I +IGILASAFL
Sbjct: 12  WIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDNS-GPHFSPLVIAIIGILASAFL 70

Query: 342 LISYYTIISKYCKGRGR----NQLNPSLESENQNQSTTHDQWQHVANGLDESLIKSITVC 175
           L++YYTIISKYC    R       +PS E E+ +  T H+ W     GLDE+LIKSITVC
Sbjct: 71  LVTYYTIISKYCGNTNRLSGTGNHDPSEEYEDNHNPTFHEPWHVATTGLDEALIKSITVC 130

Query: 174 KYKKGDGVVEGSDYAVCLSEFK 109
           KYK+ DG+VEGSD +VCLSEF+
Sbjct: 131 KYKREDGLVEGSDCSVCLSEFQ 152


>ref|XP_002319229.1| predicted protein [Populus trichocarpa] gi|222857605|gb|EEE95152.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score =  160 bits (406), Expect = 9e-38
 Identities = 82/139 (58%), Positives = 101/139 (72%), Gaps = 1/139 (0%)
 Frame = -2

Query: 522 WPPYNGYRDCSQGICSIYCPQWCYIIXXXXXXXXXXXXXSGMNFSPLIIVVIGILASAFL 343
           W PY+ YRDCSQGICSIYCPQ CYII             S  + SPLII VIGILASAF+
Sbjct: 11  WAPYSTYRDCSQGICSIYCPQRCYIIFPPPPPFTLGDDDSNTDLSPLIIAVIGILASAFI 70

Query: 342 LISYYTIISKYCKGRGRNQLNPSLESENQNQSTTHDQWQHV-ANGLDESLIKSITVCKYK 166
           L++YYT+ISKYC+ RG+      L +EN +Q  + + WQ + A GLDE+L+KSITVCKYK
Sbjct: 71  LVTYYTLISKYCRRRGQGDGATDL-NENHDQMAS-EAWQGIPAGGLDEALVKSITVCKYK 128

Query: 165 KGDGVVEGSDYAVCLSEFK 109
           KGDG VEG++ +VCLSEF+
Sbjct: 129 KGDGFVEGTECSVCLSEFQ 147


>gb|ACU17851.1| unknown [Glycine max]
          Length = 364

 Score =  160 bits (404), Expect = 2e-37
 Identities = 77/142 (54%), Positives = 95/142 (66%), Gaps = 3/142 (2%)
 Frame = -2

Query: 525 NWPPYNGYRDCSQGICSIYCPQWCYIIXXXXXXXXXXXXXSGMNFSPLIIVVIGILASAF 346
           +W PY   +DCSQG CS+YCPQWCY+I             S  NFSPL+I VIG+L SAF
Sbjct: 9   SWVPYMNNKDCSQGFCSLYCPQWCYVIYPPPPPFEFPDDDSSPNFSPLVIAVIGVLVSAF 68

Query: 345 LLISYYTIISKYCKGRGRNQLN---PSLESENQNQSTTHDQWQHVANGLDESLIKSITVC 175
           LL+SYYTIISKYC  R  +Q      ++E E  +  + H+ W     GLDE+LIKSITVC
Sbjct: 69  LLVSYYTIISKYCGSRESSQSENHEENVELEEDHNPSLHEPWHAPTIGLDEALIKSITVC 128

Query: 174 KYKKGDGVVEGSDYAVCLSEFK 109
           KYKKGDG+VE +D +VCL EF+
Sbjct: 129 KYKKGDGLVEVTDCSVCLGEFQ 150


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