BLASTX nr result

ID: Atractylodes22_contig00046349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00046349
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    46   2e-08
gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsi...    47   2e-08
gb|AAD41979.1| putative retroelement pol polyprotein [Arabidopsi...    48   7e-08
emb|CAA72990.1| unnamed protein product [Brassica oleracea var. ...    49   8e-08
gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi...    46   9e-08

>ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101216349
            [Cucumis sativus]
          Length = 1830

 Score = 46.2 bits (108), Expect(2) = 2e-08
 Identities = 17/36 (47%), Positives = 26/36 (72%)
 Frame = +2

Query: 53   FANSVSTIQIATNPVFQEWTKHIAVDCHFIRENVAD 160
            F ++ + I IA+NP F E TKHI +DCHF+R+ + +
Sbjct: 1752 FCDNQAAIAIASNPTFHERTKHIEIDCHFVRDKIVE 1787



 Score = 37.0 bits (84), Expect(2) = 2e-08
 Identities = 17/32 (53%), Positives = 23/32 (71%)
 Frame = +3

Query: 165  LKLMPVQTESRLADMFTKPLPHYTLAPLVSKM 260
            LK++P+ T  +LADMFTK LP  TL   +SK+
Sbjct: 1790 LKVLPINTSLQLADMFTKALPSSTLNRHISKL 1821


>gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1461

 Score = 46.6 bits (109), Expect(2) = 2e-08
 Identities = 18/34 (52%), Positives = 26/34 (76%)
 Frame = +2

Query: 53   FANSVSTIQIATNPVFQEWTKHIAVDCHFIRENV 154
            +++S + + IATNPVF E TKHI +DCH +RE +
Sbjct: 1382 YSDSTAAVYIATNPVFHERTKHIEIDCHTVREKL 1415



 Score = 36.6 bits (83), Expect(2) = 2e-08
 Identities = 19/39 (48%), Positives = 28/39 (71%)
 Frame = +3

Query: 162  RLKLMPVQTESRLADMFTKPLPHYTLAPLVSKMAS*YIF 278
            +LKL+ V+T+ ++AD+ TKPL  Y  A L+SKM+   IF
Sbjct: 1419 QLKLLHVKTKDQVADILTKPLFPYQFAHLLSKMSIQNIF 1457


>gb|AAD41979.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1264

 Score = 48.1 bits (113), Expect(2) = 7e-08
 Identities = 20/36 (55%), Positives = 26/36 (72%)
 Frame = +2

Query: 53   FANSVSTIQIATNPVFQEWTKHIAVDCHFIRENVAD 160
            F++S + I IA NPVF E TKHI +DCH +RE + D
Sbjct: 1185 FSDSTAAIYIAINPVFHERTKHIEIDCHTVREKIDD 1220



 Score = 33.1 bits (74), Expect(2) = 7e-08
 Identities = 19/39 (48%), Positives = 25/39 (64%)
 Frame = +3

Query: 165  LKLMPVQTESRLADMFTKPLPHYTLAPLVSKMAS*YIFE 281
            LKL+ V+TE ++AD+ TKPL       L SKM+   IFE
Sbjct: 1223 LKLLHVRTEDQVADIMTKPLFPNQFEHLKSKMSILNIFE 1261


>emb|CAA72990.1| unnamed protein product [Brassica oleracea var. acephala]
          Length = 253

 Score = 48.9 bits (115), Expect(2) = 8e-08
 Identities = 23/44 (52%), Positives = 30/44 (68%)
 Frame = +2

Query: 23  SIPTLLQL*CFANSVSTIQIATNPVFQEWTKHIAVDCHFIRENV 154
           S+P L     F++S + I IATNPVF E TKHI +DCH +RE +
Sbjct: 170 SVPVL-----FSDSTAAIYIATNPVFHERTKHIELDCHTVREKI 208



 Score = 32.3 bits (72), Expect(2) = 8e-08
 Identities = 18/38 (47%), Positives = 23/38 (60%)
 Frame = +3

Query: 165 LKLMPVQTESRLADMFTKPLPHYTLAPLVSKMAS*YIF 278
           LK + V+TE ++AD+ TKPL  Y    L SKM    IF
Sbjct: 213 LKTLHVRTEDQVADILTKPLFPYQFEHLKSKMCIRNIF 250


>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1454

 Score = 46.2 bits (108), Expect(2) = 9e-08
 Identities = 19/34 (55%), Positives = 26/34 (76%)
 Frame = +2

Query: 53   FANSVSTIQIATNPVFQEWTKHIAVDCHFIRENV 154
            +++S + I IATNPVF E TKHI +DCH +RE +
Sbjct: 1375 YSDSTAAIYIATNPVFHERTKHIKLDCHTVRERL 1408



 Score = 34.7 bits (78), Expect(2) = 9e-08
 Identities = 19/38 (50%), Positives = 25/38 (65%)
 Frame = +3

Query: 165  LKLMPVQTESRLADMFTKPLPHYTLAPLVSKMAS*YIF 278
            LKL+ V+TE ++AD+ TKPL  Y    L SKM+   IF
Sbjct: 1413 LKLLHVRTEDQVADILTKPLFPYQFEHLKSKMSILNIF 1450


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