BLASTX nr result

ID: Atractylodes22_contig00046330 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00046330
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524567.1| cell cycle regulatory protein, putative [Ric...   197   1e-48
gb|AFK37461.1| unknown [Lotus japonicus]                              196   2e-48
ref|XP_002320544.1| predicted protein [Populus trichocarpa] gi|2...   196   2e-48
emb|CBI28495.3| unnamed protein product [Vitis vinifera]              194   7e-48
ref|XP_002266143.1| PREDICTED: probable E3 ubiquitin-protein lig...   194   7e-48

>ref|XP_002524567.1| cell cycle regulatory protein, putative [Ricinus communis]
           gi|223536120|gb|EEF37775.1| cell cycle regulatory
           protein, putative [Ricinus communis]
          Length = 441

 Score =  197 bits (500), Expect = 1e-48
 Identities = 96/168 (57%), Positives = 117/168 (69%)
 Frame = +1

Query: 1   DMSCGLDHXXXXXXXXXXXXXXXXXYGQLGRSKQDLGLLPVDTIERTVCVASGLGHSLAI 180
           D++CGLDH                 YGQLGR+  ++GL PVD       +A+GLGHSLAI
Sbjct: 268 DIACGLDHSLVLCCDGTLLSSGSNIYGQLGRANHEIGLFPVDLNIHPSSIAAGLGHSLAI 327

Query: 181 CEMQSADNIGGTKGIYSWGWNQNSQLGREGPEDLPLLVHGLLEEKPLSVSGGRVHSLALT 360
           C   S+D  G  + I SWGWNQ+SQLGR GPE +PL + GL  E P+SVSGGRVHS+ALT
Sbjct: 328 CRAASSDAEGDARNIVSWGWNQSSQLGRLGPEGIPLEIEGLAGEIPVSVSGGRVHSIALT 387

Query: 361 SDGEVFAWGCGRNGRLGLGSSINEPEPMLVELSEGAKVLQAVSGFDHN 504
           S GEV+ WGCG+NGRLGLGSS +E EP+L++  EG +VLQ VSGFDHN
Sbjct: 388 SKGEVWVWGCGKNGRLGLGSSSDEAEPILLDSLEGYEVLQIVSGFDHN 435



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 43/126 (34%), Positives = 60/126 (47%), Gaps = 6/126 (4%)
 Frame = +1

Query: 142 VCVASGLGHSLAICEMQSADNIGGTKGIYSWGWNQNSQLGR--EGPEDL---PLLVHGLL 306
           V V +G  HSLA+           T  +++WG N  +QLGR    P D    P  V GL 
Sbjct: 70  VGVTAGHYHSLAVTS---------TGQLWAWGRNNEAQLGRCIPAPRDTWNEPKRVEGLN 120

Query: 307 EEKPLSVSGGRVHSLALTSDGEVFAWGCGRNGRLGLGSSINEP-EPMLVELSEGAKVLQA 483
           +   LS     V S A+ +DG ++ WG  + G+LGLG  I E   P  +E   G K+ + 
Sbjct: 121 KVHILSAYASGVVSAAIANDGSLWVWGKSKRGQLGLGKGITEAFVPSKIEALAGTKIAKV 180

Query: 484 VSGFDH 501
             G+ H
Sbjct: 181 SFGWGH 186


>gb|AFK37461.1| unknown [Lotus japonicus]
          Length = 433

 Score =  196 bits (499), Expect = 2e-48
 Identities = 94/168 (55%), Positives = 121/168 (72%)
 Frame = +1

Query: 1   DMSCGLDHXXXXXXXXXXXXXXXXXYGQLGRSKQDLGLLPVDTIERTVCVASGLGHSLAI 180
           D++CGLDH                 YGQLGR++ DLG+ PVD   + V +A+GLGHSLAI
Sbjct: 260 DIACGLDHSLILCRNGALLSCGSDAYGQLGRARPDLGIFPVDISFKPVSIAAGLGHSLAI 319

Query: 181 CEMQSADNIGGTKGIYSWGWNQNSQLGREGPEDLPLLVHGLLEEKPLSVSGGRVHSLALT 360
           CE+  +D+  GT  I SWGWNQ+SQLGR GP +LP L+  L  E P+SVSGGRVHS+ALT
Sbjct: 320 CELDESDSSVGTTNIASWGWNQSSQLGRTGPGNLPSLIDALDGENPVSVSGGRVHSVALT 379

Query: 361 SDGEVFAWGCGRNGRLGLGSSINEPEPMLVELSEGAKVLQAVSGFDHN 504
           + GE++ WG G+NGRLGL SS++E EP+L++  EG ++LQAVSGFDHN
Sbjct: 380 AKGEMWVWGSGKNGRLGLASSVDEFEPILLDTLEGFQILQAVSGFDHN 427


>ref|XP_002320544.1| predicted protein [Populus trichocarpa] gi|222861317|gb|EEE98859.1|
           predicted protein [Populus trichocarpa]
          Length = 413

 Score =  196 bits (499), Expect = 2e-48
 Identities = 93/168 (55%), Positives = 117/168 (69%)
 Frame = +1

Query: 1   DMSCGLDHXXXXXXXXXXXXXXXXXYGQLGRSKQDLGLLPVDTIERTVCVASGLGHSLAI 180
           D++CGLDH                 YGQLGR+  D+G  PVD     + +ASGLGHSLAI
Sbjct: 240 DIACGLDHSLVLCRDGTLLSSGSNVYGQLGRANHDMGFFPVDISFPALAIASGLGHSLAI 299

Query: 181 CEMQSADNIGGTKGIYSWGWNQNSQLGREGPEDLPLLVHGLLEEKPLSVSGGRVHSLALT 360
           C+ +S +  G    I SWGWNQ+SQLGR GPE++P+ V GL  E  + VSGGRVHS+A+T
Sbjct: 300 CQAKSPEGKGDATSIVSWGWNQSSQLGRPGPENVPMEVEGLAGETAILVSGGRVHSIAVT 359

Query: 361 SDGEVFAWGCGRNGRLGLGSSINEPEPMLVELSEGAKVLQAVSGFDHN 504
           S GEV+ WGCGRNGRLG+GSS +E EP++++  EG +VLQAVSGFDHN
Sbjct: 360 SKGEVWVWGCGRNGRLGIGSSCDEAEPIMLDSLEGCEVLQAVSGFDHN 407



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 41/124 (33%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
 Frame = +1

Query: 148 VASGLGHSLAICEMQSADNIGGTKGIYSWGWNQNSQLGRE--GPEDL---PLLVHGLLEE 312
           V++G  HSLA+              +++WG N   QLGR    P D    P  V GL + 
Sbjct: 40  VSAGHYHSLAVTSHGQ---------LWAWGRNHEVQLGRGLLSPRDTWNEPKRVEGLDQV 90

Query: 313 KPLSVSGGRVHSLALTSDGEVFAWGCGRNGRLGLGSSINEPE-PMLVELSEGAKVLQAVS 489
           +  +     V S A+  DG ++ WG  + G+LGLG  I E   P  VE  EG K+ +   
Sbjct: 91  QVTAAFASGVVSAAIGDDGSLWVWGKSKRGQLGLGKGITEASVPSKVEALEGQKIAKVSF 150

Query: 490 GFDH 501
           G+ H
Sbjct: 151 GWGH 154


>emb|CBI28495.3| unnamed protein product [Vitis vinifera]
          Length = 426

 Score =  194 bits (494), Expect = 7e-48
 Identities = 94/168 (55%), Positives = 116/168 (69%)
 Frame = +1

Query: 1   DMSCGLDHXXXXXXXXXXXXXXXXXYGQLGRSKQDLGLLPVDTIERTVCVASGLGHSLAI 180
           D++CGLDH                 YGQLGR  QD G++PV T    + ++SGLGHSLAI
Sbjct: 253 DVACGLDHSLVLCVNGNLLSGGSNIYGQLGRVAQDYGMVPVTTSFIPISISSGLGHSLAI 312

Query: 181 CEMQSADNIGGTKGIYSWGWNQNSQLGREGPEDLPLLVHGLLEEKPLSVSGGRVHSLALT 360
           C+++S++ IGG   I SWGWNQ  QLGR GP   PL V GL  E P++VSGGR HS+ALT
Sbjct: 313 CQVESSEAIGGATSIISWGWNQFFQLGRAGPGSCPLAVKGLAGETPVAVSGGRAHSIALT 372

Query: 361 SDGEVFAWGCGRNGRLGLGSSINEPEPMLVELSEGAKVLQAVSGFDHN 504
           S GEV+ WGCG++GRLGLGSS +E EP L+E  EG++VLQ  SGFDHN
Sbjct: 373 SKGEVWVWGCGKSGRLGLGSSTDEVEPSLLEYLEGSEVLQVASGFDHN 420



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 49/156 (31%), Positives = 72/156 (46%), Gaps = 14/156 (8%)
 Frame = +1

Query: 76  YGQLGRSKQDLGL-------LPVDTIERTVC-VASGLGHSLAICEMQSADNIGGTKGIYS 231
           +G LG     +GL        PV  +   VC V++G  HSLA+              +++
Sbjct: 25  HGALGLPSSLIGLGGDAYEPTPVPGLPSDVCSVSAGHYHSLAVTAQGE---------VWA 75

Query: 232 WGWNQNSQLGRE--GPED---LPLLVHGLLEEKPLSVSGGRVHSLALTSDGEVFAWGCGR 396
           WG N   QLGR    P D   +P  V GL + K  +     V S A+  DG ++ WG  +
Sbjct: 76  WGRNHEGQLGRGLLAPRDSWNVPTRVEGLNQVKVRAAFASGVISTAIGDDGSLWVWGKSK 135

Query: 397 NGRLGLGSSINEP-EPMLVELSEGAKVLQAVSGFDH 501
           +G+LGLG  I+E   P  VE     K+++   G+ H
Sbjct: 136 HGQLGLGKGISETVVPSRVEALAREKIVKVSLGWGH 171


>ref|XP_002266143.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Vitis
           vinifera]
          Length = 432

 Score =  194 bits (494), Expect = 7e-48
 Identities = 94/168 (55%), Positives = 116/168 (69%)
 Frame = +1

Query: 1   DMSCGLDHXXXXXXXXXXXXXXXXXYGQLGRSKQDLGLLPVDTIERTVCVASGLGHSLAI 180
           D++CGLDH                 YGQLGR  QD G++PV T    + ++SGLGHSLAI
Sbjct: 259 DVACGLDHSLVLCVNGNLLSGGSNIYGQLGRVAQDYGMVPVTTSFIPISISSGLGHSLAI 318

Query: 181 CEMQSADNIGGTKGIYSWGWNQNSQLGREGPEDLPLLVHGLLEEKPLSVSGGRVHSLALT 360
           C+++S++ IGG   I SWGWNQ  QLGR GP   PL V GL  E P++VSGGR HS+ALT
Sbjct: 319 CQVESSEAIGGATSIISWGWNQFFQLGRAGPGSCPLAVKGLAGETPVAVSGGRAHSIALT 378

Query: 361 SDGEVFAWGCGRNGRLGLGSSINEPEPMLVELSEGAKVLQAVSGFDHN 504
           S GEV+ WGCG++GRLGLGSS +E EP L+E  EG++VLQ  SGFDHN
Sbjct: 379 SKGEVWVWGCGKSGRLGLGSSTDEVEPSLLEYLEGSEVLQVASGFDHN 426



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 49/156 (31%), Positives = 72/156 (46%), Gaps = 14/156 (8%)
 Frame = +1

Query: 76  YGQLGRSKQDLGL-------LPVDTIERTVC-VASGLGHSLAICEMQSADNIGGTKGIYS 231
           +G LG     +GL        PV  +   VC V++G  HSLA+              +++
Sbjct: 31  HGALGLPSSLIGLGGDAYEPTPVPGLPSDVCSVSAGHYHSLAVTAQGE---------VWA 81

Query: 232 WGWNQNSQLGRE--GPED---LPLLVHGLLEEKPLSVSGGRVHSLALTSDGEVFAWGCGR 396
           WG N   QLGR    P D   +P  V GL + K  +     V S A+  DG ++ WG  +
Sbjct: 82  WGRNHEGQLGRGLLAPRDSWNVPTRVEGLNQVKVRAAFASGVISTAIGDDGSLWVWGKSK 141

Query: 397 NGRLGLGSSINEP-EPMLVELSEGAKVLQAVSGFDH 501
           +G+LGLG  I+E   P  VE     K+++   G+ H
Sbjct: 142 HGQLGLGKGISETVVPSRVEALAREKIVKVSLGWGH 177


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