BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00046294
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAZ08464.1| RNA polymerase II second largest subunit [Nymphae...   143   2e-32
gb|AAY89348.1| RNA polymerase II second largest subunit [Antirrh...   143   2e-32
gb|AAY85211.1| RNA polymerase II second largest subunit [Gunnera...   142   3e-32
ref|XP_003547482.1| PREDICTED: DNA-directed RNA polymerase II su...   142   4e-32
ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II su...   142   4e-32

>gb|AAZ08464.1| RNA polymerase II second largest subunit [Nymphaea colorata]
          Length = 431

 Score =  143 bits (360), Expect = 2e-32
 Identities = 67/73 (91%), Positives = 69/73 (94%)
 Frame = -3

Query: 221 QVALDYIGKRGSTTGTPKEKRIKYAKEILQREMLPHVGVGEYCETKKAYYFGYIIHRLLL 42
           QVALDYIGKRGST G  KEKRIKYAKEILQ+EMLPHVGVGEYCETKKAYYFGYIIHRLLL
Sbjct: 215 QVALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLL 274

Query: 41  CALGRRQQDDRDH 3
           CALGRR +DDRDH
Sbjct: 275 CALGRRPEDDRDH 287


>gb|AAY89348.1| RNA polymerase II second largest subunit [Antirrhinum majus]
          Length = 1200

 Score =  143 bits (360), Expect = 2e-32
 Identities = 67/73 (91%), Positives = 69/73 (94%)
 Frame = -3

Query: 221 QVALDYIGKRGSTTGTPKEKRIKYAKEILQREMLPHVGVGEYCETKKAYYFGYIIHRLLL 42
           QVALDYIGKRGST G  KEKRIKYAKEILQ+EMLPHVGVGEYCETKKAYYFGYIIHRLLL
Sbjct: 328 QVALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLL 387

Query: 41  CALGRRQQDDRDH 3
           CALGRR +DDRDH
Sbjct: 388 CALGRRAEDDRDH 400


>gb|AAY85211.1| RNA polymerase II second largest subunit [Gunnera chilensis]
          Length = 453

 Score =  142 bits (358), Expect = 3e-32
 Identities = 66/73 (90%), Positives = 69/73 (94%)
 Frame = -3

Query: 221 QVALDYIGKRGSTTGTPKEKRIKYAKEILQREMLPHVGVGEYCETKKAYYFGYIIHRLLL 42
           QVALDYIGKRGST G  KEKRIKYAKEILQ+EMLPHVGVGEYCETKKAYYFGYIIHRLLL
Sbjct: 215 QVALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLL 274

Query: 41  CALGRRQQDDRDH 3
           CA+GRR +DDRDH
Sbjct: 275 CAIGRRPEDDRDH 287


>ref|XP_003547482.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like
           [Glycine max]
          Length = 1193

 Score =  142 bits (357), Expect = 4e-32
 Identities = 66/73 (90%), Positives = 69/73 (94%)
 Frame = -3

Query: 221 QVALDYIGKRGSTTGTPKEKRIKYAKEILQREMLPHVGVGEYCETKKAYYFGYIIHRLLL 42
           QVALDYIGKRG+T G  KEKRIKYAKEILQ+EMLPHVGVGEYCETKKAYYFGYIIHRLLL
Sbjct: 322 QVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLL 381

Query: 41  CALGRRQQDDRDH 3
           CALGRR +DDRDH
Sbjct: 382 CALGRRAEDDRDH 394


>ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like
           [Glycine max]
          Length = 1192

 Score =  142 bits (357), Expect = 4e-32
 Identities = 66/73 (90%), Positives = 69/73 (94%)
 Frame = -3

Query: 221 QVALDYIGKRGSTTGTPKEKRIKYAKEILQREMLPHVGVGEYCETKKAYYFGYIIHRLLL 42
           QVALDYIGKRG+T G  KEKRIKYAKEILQ+EMLPHVGVGEYCETKKAYYFGYIIHRLLL
Sbjct: 322 QVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLL 381

Query: 41  CALGRRQQDDRDH 3
           CALGRR +DDRDH
Sbjct: 382 CALGRRAEDDRDH 394