BLASTX nr result

ID: Atractylodes22_contig00046288 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00046288
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]    75   7e-20
gb|ADN34034.1| gypsy/ty3 element polyprotein [Cucumis melo subsp...    75   9e-20
gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo s...    69   3e-18
ref|XP_004153573.1| PREDICTED: uncharacterized protein LOC101213...    64   6e-18
ref|XP_004146399.1| PREDICTED: uncharacterized protein LOC101219...    64   6e-18

>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score = 75.1 bits (183), Expect(2) = 7e-20
 Identities = 37/86 (43%), Positives = 54/86 (62%)
 Frame = +3

Query: 96   VSKDMVKQLGLTMDHTTSFXXXXXXXXXXXXXXLCKGVELVLPEIQIVADFLPLELGSTD 275
            +S ++V+QL L +  TTS+              +C+GV + +  + +V DFLPLELG+TD
Sbjct: 1083 LSLELVQQLTLPLTTTTSYGVMMGTGISVKGKGICRGVCISMQGLTVVEDFLPLELGNTD 1142

Query: 276  VILGMQWLESLGEMTVNWGTLCMQFK 353
            VILGM WL +LG++ VNW  L M+ K
Sbjct: 1143 VILGMPWLGTLGDVKVNWKMLTMKIK 1168



 Score = 47.0 bits (110), Expect(2) = 7e-20
 Identities = 20/31 (64%), Positives = 26/31 (83%)
 Frame = +2

Query: 2    VGLTSPKTMKLRGYINQKEVIVLIDCGASHN 94
            VGLT+P TMK++G I  KEVI+L+D GA+HN
Sbjct: 1051 VGLTTPGTMKIKGTIGSKEVIILVDSGATHN 1081


>gb|ADN34034.1| gypsy/ty3 element polyprotein [Cucumis melo subsp. melo]
          Length = 473

 Score = 75.5 bits (184), Expect(2) = 9e-20
 Identities = 37/85 (43%), Positives = 50/85 (58%)
 Frame = +3

Query: 96  VSKDMVKQLGLTMDHTTSFXXXXXXXXXXXXXXLCKGVELVLPEIQIVADFLPLELGSTD 275
           +S  +V+ L L M   T++              +CKG+ + LP I IV DFLPLELG+ D
Sbjct: 383 ISLKLVESLNLPMAAITNYGVIMGSEKAVQGREMCKGITVGLPVITIVEDFLPLELGNLD 442

Query: 276 VILGMQWLESLGEMTVNWGTLCMQF 350
           ++LGMQWL+  G MTV+W  L M F
Sbjct: 443 MVLGMQWLQKQGAMTVDWKALTMNF 467



 Score = 46.2 bits (108), Expect(2) = 9e-20
 Identities = 15/33 (45%), Positives = 27/33 (81%)
 Frame = +2

Query: 2   VGLTSPKTMKLRGYINQKEVIVLIDCGASHNCV 100
           VGLT+P T K++G +  +E+++++DCGA+HN +
Sbjct: 351 VGLTAPGTFKIKGRVEDREIVIMVDCGATHNFI 383


>gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1185

 Score = 69.3 bits (168), Expect(2) = 3e-18
 Identities = 33/85 (38%), Positives = 47/85 (55%)
 Frame = +3

Query: 96  VSKDMVKQLGLTMDHTTSFXXXXXXXXXXXXXXLCKGVELVLPEIQIVADFLPLELGSTD 275
           +S  +V+++ +    TT +              +C GV + LP + +V DFLPLELG  D
Sbjct: 394 ISLRLVEEMQIATTETTQYGVIMGSGKAVQGKGMCTGVVVGLPGLTVVEDFLPLELGHLD 453

Query: 276 VILGMQWLESLGEMTVNWGTLCMQF 350
           ++LGMQWL   G MTV+W  L M F
Sbjct: 454 MVLGMQWLPKQGAMTVDWRNLAMTF 478



 Score = 47.0 bits (110), Expect(2) = 3e-18
 Identities = 18/33 (54%), Positives = 27/33 (81%)
 Frame = +2

Query: 2   VGLTSPKTMKLRGYINQKEVIVLIDCGASHNCV 100
           VGLT+P T K++G +  +EV+V+IDCGA+HN +
Sbjct: 362 VGLTAPGTSKIKGKVEDREVVVMIDCGATHNFI 394


>ref|XP_004153573.1| PREDICTED: uncharacterized protein LOC101213561, partial [Cucumis
           sativus]
          Length = 764

 Score = 64.3 bits (155), Expect(2) = 6e-18
 Identities = 33/85 (38%), Positives = 47/85 (55%)
 Frame = +3

Query: 96  VSKDMVKQLGLTMDHTTSFXXXXXXXXXXXXXXLCKGVELVLPEIQIVADFLPLELGSTD 275
           +S  +V++L L    T+ +              +C+G+EL L   ++ A+FLPLELG  D
Sbjct: 441 ISDKVVQELSLPTKTTSHYGVILGSGAAVKGKGICEGIELELEGWKVEANFLPLELGGVD 500

Query: 276 VILGMQWLESLGEMTVNWGTLCMQF 350
            +LGMQWL SLG   V+W  L M F
Sbjct: 501 GVLGMQWLYSLGVTEVDWKNLTMTF 525



 Score = 51.2 bits (121), Expect(2) = 6e-18
 Identities = 22/33 (66%), Positives = 28/33 (84%)
 Frame = +2

Query: 2   VGLTSPKTMKLRGYINQKEVIVLIDCGASHNCV 100
           VGLT+P TMK+RG I  +EVI+LIDCGA+HN +
Sbjct: 409 VGLTNPGTMKVRGKIKDREVIILIDCGATHNFI 441


>ref|XP_004146399.1| PREDICTED: uncharacterized protein LOC101219499 [Cucumis sativus]
          Length = 718

 Score = 64.3 bits (155), Expect(2) = 6e-18
 Identities = 33/85 (38%), Positives = 47/85 (55%)
 Frame = +3

Query: 96  VSKDMVKQLGLTMDHTTSFXXXXXXXXXXXXXXLCKGVELVLPEIQIVADFLPLELGSTD 275
           +S  +V++L L    T+ +              +C+G+EL L   ++ A+FLPLELG  D
Sbjct: 414 ISDKVVQELSLPTKTTSHYGVILGSGAAVKGKGICEGIELELEGWKVEANFLPLELGGVD 473

Query: 276 VILGMQWLESLGEMTVNWGTLCMQF 350
            +LGMQWL SLG   V+W  L M F
Sbjct: 474 GVLGMQWLYSLGVTEVDWKNLTMTF 498



 Score = 51.2 bits (121), Expect(2) = 6e-18
 Identities = 22/33 (66%), Positives = 28/33 (84%)
 Frame = +2

Query: 2   VGLTSPKTMKLRGYINQKEVIVLIDCGASHNCV 100
           VGLT+P TMK+RG I  +EVI+LIDCGA+HN +
Sbjct: 382 VGLTNPGTMKVRGKIKDREVIILIDCGATHNFI 414


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