BLASTX nr result

ID: Atractylodes22_contig00046279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00046279
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...    72   6e-11
ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...    70   2e-10
ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...    70   2e-10
gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]...    68   7e-10

>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 29/77 (37%), Positives = 50/77 (64%)
 Frame = -3

Query: 235 IHGTPVHLRTRLAQLCMSGVAQHWFAVVKVVHEDLTWEQLTRELLQRFNGLEIHNPYEQL 56
           +  T   +R +LA+L M G   HWF ++    ++L+WE+L R L+ R+ G  + NP+E+L
Sbjct: 80  VQNTTDKMRVKLARLSMEGSTIHWFNLLMETEDELSWEKLKRALIARYGGRRLENPFEEL 139

Query: 55  STIQQVSSIHDYIDDFE 5
           STI+Q  S+ ++++ FE
Sbjct: 140 STIRQKGSVEEFVEAFE 156


>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 28/77 (36%), Positives = 49/77 (63%)
 Frame = -3

Query: 235 IHGTPVHLRTRLAQLCMSGVAQHWFAVVKVVHEDLTWEQLTRELLQRFNGLEIHNPYEQL 56
           +  T   +R +LA+L M G   HWF ++    ++L+WE L R L+ R+ G  + NP+E+L
Sbjct: 97  VQDTSDDMRVKLARLSMEGSTIHWFNLLMETEDELSWENLKRALIARYGGRRLENPFEEL 156

Query: 55  STIQQVSSIHDYIDDFE 5
           ST++Q  S+ ++++ FE
Sbjct: 157 STLRQKGSVEEFVEAFE 173


>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 27/77 (35%), Positives = 52/77 (67%)
 Frame = -3

Query: 235  IHGTPVHLRTRLAQLCMSGVAQHWFAVVKVVHEDLTWEQLTRELLQRFNGLEIHNPYEQL 56
            +  TP  +R +L++L M G   HWF ++    +DL+ E+L + L+ R++G  + NP+E+L
Sbjct: 770  VQNTPDDMRVKLSRLSMEGPTIHWFNLLMETEDDLSREKLKKALIARYDGRRLENPFEEL 829

Query: 55   STIQQVSSIHDYIDDFE 5
            ST++Q+ S+ ++++ FE
Sbjct: 830  STLRQIGSVEEFVEAFE 846


>gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]
           gi|124360393|gb|ABN08406.1| Retrotransposon gag protein
           [Medicago truncatula]
          Length = 224

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/77 (42%), Positives = 46/77 (59%)
 Frame = -3

Query: 235 IHGTPVHLRTRLAQLCMSGVAQHWFAVVKVVHEDLTWEQLTRELLQRFNGLEIHNPYEQL 56
           +  T   ++  LAQLCM G   H+F  +   +E LTWE L   LL+R+ G+   N +EQL
Sbjct: 107 VQNTTPEIKVNLAQLCMDGPTIHFFKGLLEENETLTWEDLKDALLERYGGVSDGNVFEQL 166

Query: 55  STIQQVSSIHDYIDDFE 5
           S +QQ  +I +YI DFE
Sbjct: 167 SALQQEGTIEEYIADFE 183


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