BLASTX nr result

ID: Atractylodes22_contig00046218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00046218
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB03099.1| starch branching enzyme class II, partial [Arabid...    95   7e-18
ref|XP_002879609.1| SBE2.1 [Arabidopsis lyrata subsp. lyrata] gi...    94   9e-18
ref|NP_181180.1| 1,4-alpha-glucan branching enzyme [Arabidopsis ...    94   9e-18
emb|CAB40746.1| starch branching enzyme II [Solanum tuberosum]         93   3e-17
dbj|BAB64912.1| starch branching enzyme II [Ipomoea batatas]           92   4e-17

>gb|AAB03099.1| starch branching enzyme class II, partial [Arabidopsis thaliana]
          Length = 854

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 57/131 (43%), Positives = 66/131 (50%), Gaps = 41/131 (31%)
 Frame = +3

Query: 72  DDLKSMIDKGQELGLVVLMDIVHHHSSSNTSNGRKMFDG----YFNSGERGYPWM*KLHY 239
           DDLKS+IDK  ELGLVVLMDIVH H+S NT +G  MFDG    YF+SG RGY WM     
Sbjct: 392 DDLKSLIDKAHELGLVVLMDIVHSHASKNTLDGLDMFDGTDGQYFHSGSRGYHWMWDTRL 451

Query: 240 LNYGHEEVI-------------------------------------FSRNYNEYYSPTTE 308
            NYG  EV+                                     F+ NYNEY+  +T+
Sbjct: 452 FNYGSWEVLRYLLSNARWWLEEYKFDGFRFDGVTSMMYTHHGLQVEFTGNYNEYFGYSTD 511

Query: 309 VDVVDYFMLGN 341
           VD V Y ML N
Sbjct: 512 VDAVVYLMLVN 522


>ref|XP_002879609.1| SBE2.1 [Arabidopsis lyrata subsp. lyrata]
           gi|297325448|gb|EFH55868.1| SBE2.1 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 829

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 57/131 (43%), Positives = 66/131 (50%), Gaps = 41/131 (31%)
 Frame = +3

Query: 72  DDLKSMIDKGQELGLVVLMDIVHHHSSSNTSNGRKMFDG----YFNSGERGYPWM*KLHY 239
           DDLKS+IDK  ELGLVVLMDIVH H+S NT +G  MFDG    YF+SG RGY WM     
Sbjct: 369 DDLKSLIDKAHELGLVVLMDIVHSHASKNTLDGLDMFDGTDGQYFHSGSRGYHWMWDSRL 428

Query: 240 LNYGHEEVI-------------------------------------FSRNYNEYYSPTTE 308
            NYG  EV+                                     F+ NYNEY+  +T+
Sbjct: 429 FNYGSWEVLRYLLSNARWWLEEYKFDGFRFDGVTSMMYTHHGLQVEFTGNYNEYFGYSTD 488

Query: 309 VDVVDYFMLGN 341
           VD V Y ML N
Sbjct: 489 VDAVVYLMLVN 499


>ref|NP_181180.1| 1,4-alpha-glucan branching enzyme [Arabidopsis thaliana]
           gi|75097945|sp|O23647.1|GLGB1_ARATH RecName:
           Full=1,4-alpha-glucan-branching enzyme 2-1,
           chloroplastic/amyloplastic; Short=AtSBE II-1; AltName:
           Full=Branching enzyme 3; Short=AtBE3; AltName:
           Full=Starch-branching enzyme 2-1; Flags: Precursor
           gi|2274862|emb|CAA04134.1| Starch branching enzyme II
           [Arabidopsis thaliana] gi|4581160|gb|AAD24644.1| starch
           branching enzyme II [Arabidopsis thaliana]
           gi|22531146|gb|AAM97077.1| unknown protein [Arabidopsis
           thaliana] gi|110742084|dbj|BAE98973.1| starch branching
           enzyme class II [Arabidopsis thaliana]
           gi|330254153|gb|AEC09247.1| 1,4-alpha-glucan branching
           enzyme [Arabidopsis thaliana]
          Length = 858

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 57/131 (43%), Positives = 66/131 (50%), Gaps = 41/131 (31%)
 Frame = +3

Query: 72  DDLKSMIDKGQELGLVVLMDIVHHHSSSNTSNGRKMFDG----YFNSGERGYPWM*KLHY 239
           DDLKS+IDK  ELGLVVLMDIVH H+S NT +G  MFDG    YF+SG RGY WM     
Sbjct: 396 DDLKSLIDKAHELGLVVLMDIVHSHASKNTLDGLDMFDGTDGQYFHSGSRGYHWMWDSRL 455

Query: 240 LNYGHEEVI-------------------------------------FSRNYNEYYSPTTE 308
            NYG  EV+                                     F+ NYNEY+  +T+
Sbjct: 456 FNYGSWEVLRYLLSNARWWLEEYKFDGFRFDGVTSMMYTHHGLQVEFTGNYNEYFGYSTD 515

Query: 309 VDVVDYFMLGN 341
           VD V Y ML N
Sbjct: 516 VDAVVYLMLVN 526


>emb|CAB40746.1| starch branching enzyme II [Solanum tuberosum]
          Length = 878

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 55/131 (41%), Positives = 66/131 (50%), Gaps = 41/131 (31%)
 Frame = +3

Query: 72  DDLKSMIDKGQELGLVVLMDIVHHHSSSNTSNGRKMFDG----YFNSGERGYPWM*KLHY 239
           DDLKS+IDK  ELG+VVLMDIVH H+S+NT +G  MFDG    YF+SG RGY WM     
Sbjct: 416 DDLKSLIDKAHELGIVVLMDIVHSHASNNTLDGLNMFDGTDSCYFHSGARGYHWMWDFRL 475

Query: 240 LNYGHEEVI-------------------------------------FSRNYNEYYSPTTE 308
            NYG+ EV+                                     F+ NY EY+   T+
Sbjct: 476 FNYGNWEVLRYLLSNARWWLDEFKFDGFRFDGVTSMMCTHHGLSVGFTGNYEEYFGLATD 535

Query: 309 VDVVDYFMLGN 341
           VD V Y ML N
Sbjct: 536 VDAVVYLMLVN 546


>dbj|BAB64912.1| starch branching enzyme II [Ipomoea batatas]
          Length = 868

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 55/131 (41%), Positives = 67/131 (51%), Gaps = 41/131 (31%)
 Frame = +3

Query: 72  DDLKSMIDKGQELGLVVLMDIVHHHSSSNTSNGRKMFDG----YFNSGERGYPWM*KLHY 239
           DDLKS+ID+  ELGLVVLMDIVH H+S+NT +G  MFDG    YF+SG RGY WM     
Sbjct: 416 DDLKSLIDRAHELGLVVLMDIVHSHASNNTLDGLNMFDGTDSCYFHSGTRGYHWMWDSRL 475

Query: 240 LNYGHEEVI-------------------------------------FSRNYNEYYSPTTE 308
            NYG+ EV+                                     F+ NY+EY+   T+
Sbjct: 476 FNYGNWEVLRYLLSNARWWLDEYKFDGFRFDGVTSMMYTHHGLSVGFTGNYSEYFGYATD 535

Query: 309 VDVVDYFMLGN 341
           VD V Y ML N
Sbjct: 536 VDAVVYLMLVN 546


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