BLASTX nr result

ID: Atractylodes22_contig00046137 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00046137
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002447687.1| hypothetical protein SORBIDRAFT_06g013016 [S...   116   1e-27
emb|CAH66492.1| H0321H01.1 [Oryza sativa Indica Group] gi|116309...   115   2e-27
emb|CAN66612.1| hypothetical protein VITISV_017559 [Vitis vinifera]   117   2e-27
gb|ABF97186.1| retrotransposon protein, putative, unclassified [...   114   4e-27
emb|CAN68742.1| hypothetical protein VITISV_036839 [Vitis vinifera]   119   4e-27

>ref|XP_002447687.1| hypothetical protein SORBIDRAFT_06g013016 [Sorghum bicolor]
           gi|241938870|gb|EES12015.1| hypothetical protein
           SORBIDRAFT_06g013016 [Sorghum bicolor]
          Length = 319

 Score =  116 bits (291), Expect(2) = 1e-27
 Identities = 52/121 (42%), Positives = 74/121 (61%), Gaps = 1/121 (0%)
 Frame = +3

Query: 54  KKSTGGCQLLGGKFISWXXXXXXXXXXXXXXVEYVVV-SCCAQILWIKNQLADFDWVFEK 230
           K ++G CQ LG   +SW               EY+   +CCAQ+LW++  L DF   F K
Sbjct: 197 KSTSGTCQFLGRSLVSWSSKKQNCVALSTAEAEYIAAGACCAQLLWMRQTLRDFGCQFTK 256

Query: 231 VPIFCDNTSAISISNNLALHSQVKRIDVRYHFI*DHVMKSDVELHFISNDFRLANLFAKP 410
           +P+ CDN SAI ++NN   HS+ K IDVR+HF+ DH  K D+E+H +S + +LA++F KP
Sbjct: 257 IPLLCDNESAIKLANNPVSHSRTKHIDVRHHFLRDHEAKGDIEIHHVSTEKQLADIFTKP 316

Query: 411 L 413
           L
Sbjct: 317 L 317



 Score = 31.6 bits (70), Expect(2) = 1e-27
 Identities = 12/16 (75%), Positives = 15/16 (93%)
 Frame = +1

Query: 13  GLSDSDFAGCKLDRKN 60
           G SDSD+AGCK+DRK+
Sbjct: 183 GYSDSDYAGCKVDRKS 198


>emb|CAH66492.1| H0321H01.1 [Oryza sativa Indica Group] gi|116309443|emb|CAH66516.1|
            OSIGBa0142C11.4 [Oryza sativa Indica Group]
          Length = 1566

 Score =  115 bits (289), Expect(2) = 2e-27
 Identities = 55/121 (45%), Positives = 73/121 (60%), Gaps = 1/121 (0%)
 Frame = +3

Query: 54   KKSTGGCQLLGGKFISWXXXXXXXXXXXXXXVEYVVV-SCCAQILWIKNQLADFDWVFEK 230
            K +TG CQ LG   +SW              VEYV   SCCAQ+LW+K  L DF + F K
Sbjct: 1420 KSTTGTCQFLGPSLVSWFSKKQNSIVLSTTEVEYVTAGSCCAQLLWMKQTLKDFGYNFTK 1479

Query: 231  VPIFCDNTSAISISNNLALHSQVKRIDVRYHFI*DHVMKSDVELHFISNDFRLANLFAKP 410
            +P+ CDN SAI I+NN   HS+ K ID+R+HF+ DH  K D+ L  +  + +LA++F KP
Sbjct: 1480 IPLLCDNESAIKIANNPVQHSRTKHIDIRHHFLRDHETKGDICLTHVRTETQLADIFTKP 1539

Query: 411  L 413
            L
Sbjct: 1540 L 1540



 Score = 31.6 bits (70), Expect(2) = 2e-27
 Identities = 12/16 (75%), Positives = 15/16 (93%)
 Frame = +1

Query: 13   GLSDSDFAGCKLDRKN 60
            G SDSD+AGCK+DRK+
Sbjct: 1406 GYSDSDYAGCKVDRKS 1421


>emb|CAN66612.1| hypothetical protein VITISV_017559 [Vitis vinifera]
          Length = 333

 Score =  117 bits (292), Expect(2) = 2e-27
 Identities = 53/121 (43%), Positives = 74/121 (61%), Gaps = 1/121 (0%)
 Frame = +3

Query: 54  KKSTGGCQLLGGKFISWXXXXXXXXXXXXXXVEYVVVS-CCAQILWIKNQLADFDWVFEK 230
           K ++G C  LG   +SW               +Y+ V  CCAQI W+K  L+DF+ +FE 
Sbjct: 197 KSTSGTCHFLGNSLVSWHSKKQNSVALSTAEAKYIAVGLCCAQIFWMKQTLSDFNLIFEH 256

Query: 231 VPIFCDNTSAISISNNLALHSQVKRIDVRYHFI*DHVMKSDVELHFISNDFRLANLFAKP 410
           VPI CDNTSAI+IS N   HS+ K I++R+HF+ D   K D+ L F+S  ++LA++F KP
Sbjct: 257 VPIKCDNTSAINISKNSVQHSRTKHIEIRHHFLRDRAQKGDITLEFVSTKYQLADIFTKP 316

Query: 411 L 413
           L
Sbjct: 317 L 317



 Score = 30.0 bits (66), Expect(2) = 2e-27
 Identities = 11/16 (68%), Positives = 15/16 (93%)
 Frame = +1

Query: 13  GLSDSDFAGCKLDRKN 60
           G SD+DFAGCK++RK+
Sbjct: 183 GYSDTDFAGCKVERKS 198


>gb|ABF97186.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1759

 Score =  114 bits (286), Expect(2) = 4e-27
 Identities = 54/121 (44%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
 Frame = +3

Query: 54   KKSTGGCQLLGGKFISWXXXXXXXXXXXXXXVEYVVV-SCCAQILWIKNQLADFDWVFEK 230
            K +TG CQ LG   +SW               EYV   SCCAQ+LW+K  L DF + F K
Sbjct: 1468 KSTTGTCQFLGRSLVSWSSKKQNSIALSTTEAEYVAAGSCCAQLLWMKQTLKDFGYNFTK 1527

Query: 231  VPIFCDNTSAISISNNLALHSQVKRIDVRYHFI*DHVMKSDVELHFISNDFRLANLFAKP 410
            +P+ CDN SAI I+NN   HS+ K ID+R+HF+ DH  K D+ L  +  + +LA++F KP
Sbjct: 1528 IPLLCDNESAIKIANNPVQHSRTKHIDIRHHFLRDHETKGDIFLTHVRTESQLADIFTKP 1587

Query: 411  L 413
            L
Sbjct: 1588 L 1588



 Score = 31.6 bits (70), Expect(2) = 4e-27
 Identities = 12/16 (75%), Positives = 15/16 (93%)
 Frame = +1

Query: 13   GLSDSDFAGCKLDRKN 60
            G SDSD+AGCK+DRK+
Sbjct: 1454 GYSDSDYAGCKVDRKS 1469


>emb|CAN68742.1| hypothetical protein VITISV_036839 [Vitis vinifera]
          Length = 334

 Score =  119 bits (299), Expect(2) = 4e-27
 Identities = 56/121 (46%), Positives = 75/121 (61%), Gaps = 1/121 (0%)
 Frame = +3

Query: 54  KKSTGGCQLLGGKFISWXXXXXXXXXXXXXXVEYVVVS-CCAQILWIKNQLADFDWVFEK 230
           K ++G C  LG   +SW               EY+ V  CCAQILW+K  L+DF+ +FE 
Sbjct: 197 KSTSGTCHFLGHSLVSWHSKKQNSVALSTAEAEYIAVGLCCAQILWMKQTLSDFNLIFEH 256

Query: 231 VPIFCDNTSAISISNNLALHSQVKRIDVRYHFI*DHVMKSDVELHFISNDFRLANLFAKP 410
           VPI CDNTSAI+IS N   HS+ K I++R+HF+ DH  K ++ L F+S   +LAN+F KP
Sbjct: 257 VPIKCDNTSAINISKNPVQHSRTKHIEIRHHFLRDHAQKGNITLEFVSTKDQLANIFTKP 316

Query: 411 L 413
           L
Sbjct: 317 L 317



 Score = 26.6 bits (57), Expect(2) = 4e-27
 Identities = 9/16 (56%), Positives = 15/16 (93%)
 Frame = +1

Query: 13  GLSDSDFAGCKLDRKN 60
           G S+++FAGCK++RK+
Sbjct: 183 GYSNAEFAGCKVERKS 198


Top