BLASTX nr result

ID: Atractylodes22_contig00046124 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00046124
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAL46523.1| hypothetical protein [Gentiana scabra x Gentiana...   175   3e-42
emb|CAJ65807.1| polyprotein [Citrus sinensis]                         170   1e-40
gb|AAO19383.1| putative polyprotein [Oryza sativa Japonica Group...   162   2e-38
gb|ABB47191.1| retrotransposon protein, putative, Ty3-gypsy subc...   162   2e-38
gb|ABA96087.1| retrotransposon protein, putative, Ty3-gypsy subc...   162   2e-38

>dbj|BAL46523.1| hypothetical protein [Gentiana scabra x Gentiana triflora]
          Length = 1152

 Score =  175 bits (444), Expect = 3e-42
 Identities = 79/103 (76%), Positives = 95/103 (92%)
 Frame = -3

Query: 311 KAHEEHLRIALETLRQKQLFAKFSKCEFWLKQVSFLGHVISSEGVEVDPAKIESVANWPR 132
           K HEEHLRI L+TL++K+L+AKFSKCEFWLKQVSFLGHVIS +G++VDPAKIE+V+ WPR
Sbjct: 377 KEHEEHLRIVLQTLKEKKLYAKFSKCEFWLKQVSFLGHVISGDGIQVDPAKIEAVSKWPR 436

Query: 131 PTSVSEIRSFLGLAGYYRRFVEGFSKIALPMTRLLRKGIKFEW 3
           PT+V+EIRSFLGLAGYYR+FV+ FSKIA P+TRL +K IKFEW
Sbjct: 437 PTTVTEIRSFLGLAGYYRKFVQDFSKIATPLTRLTQKNIKFEW 479


>emb|CAJ65807.1| polyprotein [Citrus sinensis]
          Length = 533

 Score =  170 bits (431), Expect = 1e-40
 Identities = 78/101 (77%), Positives = 90/101 (89%)
 Frame = -3

Query: 305 HEEHLRIALETLRQKQLFAKFSKCEFWLKQVSFLGHVISSEGVEVDPAKIESVANWPRPT 126
           HEEHLR  L+TLRQKQL+AKFSKCEFWL +V FLGHVIS+EG+ VDP KIE+V NW RPT
Sbjct: 16  HEEHLRTILQTLRQKQLYAKFSKCEFWLDKVVFLGHVISAEGIYVDPQKIEAVVNWERPT 75

Query: 125 SVSEIRSFLGLAGYYRRFVEGFSKIALPMTRLLRKGIKFEW 3
           +V+E+RSFLGLAGYYRRFVEGFSKIA+P+TRL RK  KF+W
Sbjct: 76  NVTEVRSFLGLAGYYRRFVEGFSKIAIPLTRLTRKNAKFQW 116


>gb|AAO19383.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108710558|gb|ABF98353.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 1770

 Score =  162 bits (411), Expect = 2e-38
 Identities = 74/101 (73%), Positives = 88/101 (87%)
 Frame = -3

Query: 305  HEEHLRIALETLRQKQLFAKFSKCEFWLKQVSFLGHVISSEGVEVDPAKIESVANWPRPT 126
            HEEHLR+ALE LR+ QL+AKFSKCEFWL +V FLGHVIS+ GV VDP+ +ESV NW +P 
Sbjct: 983  HEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWKQPK 1042

Query: 125  SVSEIRSFLGLAGYYRRFVEGFSKIALPMTRLLRKGIKFEW 3
            +VSEIRSFLGLAGYYRRF+E FSKIA PMTRLL+K +K++W
Sbjct: 1043 TVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKW 1083


>gb|ABB47191.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1443

 Score =  162 bits (411), Expect = 2e-38
 Identities = 74/101 (73%), Positives = 88/101 (87%)
 Frame = -3

Query: 305 HEEHLRIALETLRQKQLFAKFSKCEFWLKQVSFLGHVISSEGVEVDPAKIESVANWPRPT 126
           HEEHLR+ALE LR+ QL+AKFSKCEFWL +V FLGHVIS+ GV VDP+ +ESV NW +P 
Sbjct: 672 HEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWKQPK 731

Query: 125 SVSEIRSFLGLAGYYRRFVEGFSKIALPMTRLLRKGIKFEW 3
           +VSEIRSFLGLAGYYRRF+E FSKIA PMTRLL+K +K++W
Sbjct: 732 TVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKW 772


>gb|ABA96087.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1111

 Score =  162 bits (411), Expect = 2e-38
 Identities = 74/101 (73%), Positives = 88/101 (87%)
 Frame = -3

Query: 305 HEEHLRIALETLRQKQLFAKFSKCEFWLKQVSFLGHVISSEGVEVDPAKIESVANWPRPT 126
           HEEHLR+ALE LR+ QL+AKFSKCEFWL +V FLGHVIS+ GV VDP+ +ESV NW +P 
Sbjct: 340 HEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWKQPK 399

Query: 125 SVSEIRSFLGLAGYYRRFVEGFSKIALPMTRLLRKGIKFEW 3
           +VSEIRSFLGLAGYYRRF+E FSKIA PMTRLL+K +K++W
Sbjct: 400 TVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKW 440


Top