BLASTX nr result

ID: Atractylodes22_contig00046057 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00046057
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546247.1| PREDICTED: cleavage and polyadenylation spec...    61   1e-07
emb|CBI30994.3| unnamed protein product [Vitis vinifera]               59   5e-07
ref|XP_002281594.1| PREDICTED: cleavage and polyadenylation spec...    59   5e-07
ref|XP_003534764.1| PREDICTED: cleavage and polyadenylation spec...    58   7e-07
ref|XP_002523201.1| conserved hypothetical protein [Ricinus comm...    57   2e-06

>ref|XP_003546247.1| PREDICTED: cleavage and polyadenylation specificity factor
           CPSF30-like [Glycine max]
          Length = 691

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/47 (59%), Positives = 35/47 (74%)
 Frame = -2

Query: 426 VLQKIQQLTSYNYGNSNRFSQNRNANHSQQSEKSQPPQGVNGVNQPI 286
           VLQKIQ L SYNY +SN+F Q R A+++QQ+EK Q PQG N  NQ +
Sbjct: 160 VLQKIQHLFSYNYNSSNKFFQQRGASYNQQAEKPQLPQGTNSTNQGV 206


>emb|CBI30994.3| unnamed protein product [Vitis vinifera]
          Length = 485

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/44 (68%), Positives = 36/44 (81%)
 Frame = -2

Query: 426 VLQKIQQLTSYNYGNSNRFSQNRNANHSQQSEKSQPPQGVNGVN 295
           V QKIQQL+S+NYG+SNRF QNRN  ++QQ+EKSQ  QG N VN
Sbjct: 77  VFQKIQQLSSFNYGSSNRFYQNRNP-YNQQTEKSQILQGSNAVN 119


>ref|XP_002281594.1| PREDICTED: cleavage and polyadenylation specificity factor
           CPSF30-like [Vitis vinifera]
          Length = 673

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/44 (68%), Positives = 36/44 (81%)
 Frame = -2

Query: 426 VLQKIQQLTSYNYGNSNRFSQNRNANHSQQSEKSQPPQGVNGVN 295
           V QKIQQL+S+NYG+SNRF QNRN  ++QQ+EKSQ  QG N VN
Sbjct: 150 VFQKIQQLSSFNYGSSNRFYQNRNP-YNQQTEKSQILQGSNAVN 192


>ref|XP_003534764.1| PREDICTED: cleavage and polyadenylation specificity factor
           CPSF30-like [Glycine max]
          Length = 681

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/59 (50%), Positives = 39/59 (66%), Gaps = 4/59 (6%)
 Frame = -2

Query: 426 VLQKIQQLTSYNYGNSNRFSQNRNANHSQQSEKSQPPQGVNGVNQPIR----PTTMGSA 262
           VLQKIQ L SYNY +SN+F Q R A+++QQ+EK   PQG N  NQ +     P  +G+A
Sbjct: 160 VLQKIQHLYSYNYNSSNKFFQQRGASYNQQAEKPLLPQGNNSTNQGVTGNPLPAELGNA 218


>ref|XP_002523201.1| conserved hypothetical protein [Ricinus communis]
           gi|223537608|gb|EEF39232.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 702

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/60 (51%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
 Frame = -2

Query: 426 VLQKIQQLTSYNYGNSNRFSQNRNANHSQQSEKSQPPQGVNGVNQPI--RPTTMGSATFQ 253
           VLQKIQQL SYNYG+SN+F Q R A   Q ++KSQ  QG N + Q +  +P    SA  Q
Sbjct: 163 VLQKIQQLNSYNYGSSNKFFQQRGAGFQQHADKSQFSQGPNNMGQGMAAKPPGTESANVQ 222


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